FC930094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: U183_ARATH (UPF0183 protein At3g51130 OS=Arabidopsis thaliana GN=At3g51130 PE=2 SV=2) HSP 1 Score: 356.681 bits (914), Expect = 6.506e-98 Identity = 159/195 (81.54%), Postives = 175/195 (89.74%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPAQYADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPIGSLYMEEVHAKLGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII 587 G+YDKE +Y LFYPGLSF FPIP QY DCC D EA LPLEFPDGTTPVTCRVSIYD S+DKKVGVG L D+A P LP GSLYMEEVH K G+EL+FTVG QH+PFGASPQDVWTELGRPCGIH KQVDQMVIHSASDPRP++T+CGDYFYNY+TRGLDILFDG+THK+KKF++HTNYPGHADFNSYIKCNF+I Sbjct: 140 GIYDKERGIYSLFYPGLSFEFPIPNQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTTICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVI 334
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: U183_DROME (UPF0183 protein CG7083 OS=Drosophila melanogaster GN=CG7083 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25 Identity = 80/224 (35.71%), Postives = 113/224 (50.45%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPAQ----YADCCQDREAELPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPIG----SLYMEEV--------HAKLGEELHFTVGS------------QHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIIL 590 GVYD ++ L + GLSF FP+ ++ YA L F +G +PV ++S+Y GS ++ + + PSLP+ +Y+E H K + FT GS + + FG S +DV T LG P I K D+M IHS+S R + D F+NY+T G+D+LFD +T KKFI+HTNYPGH +FN Y +C F L Sbjct: 118 GVYDAAKQLFALHFRGLSFYFPVDSKLHSGYAHGLSS------LVFLNGASPVVSKMSLYAGS--------NVLENRV-PSLPLSCYHRQMYLESATVLRTAFGHTKGLKLKLFTEGSGRALEPRRQCFTRELLFGDSCEDVATSLGAPNRIFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTCKKFILHTNYPGHFNFNMYHRCEFQFL 326
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: CP070_HUMAN (UPF0183 protein C16orf70 OS=Homo sapiens GN=C16orf70 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.791e-24 Identity = 79/223 (35.43%), Postives = 110/223 (49.33%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPA-QYADCCQDREAE--LPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPI----GSLYMEEVHAK---------------------LGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII 587 GVY+ ++ L + GLSF+F + + A + A L+ P G T R+ IY G+ SL D AP +P+ G++Y E V L + V + + FG S QDV + LG P + K D+M IHS S + + C DYF+NY+T G+DILFD THK+KKF++HTNYPGH +FN Y +C F I Sbjct: 118 GVYNSAEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGN--------SLQDTK-APMMPLSCFLGNVYAESVDVLRDGTGPAGLRLRLLAAGCGPGLLADAKMRVFERSVYFGDSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKI 329
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: CP070_RAT (UPF0183 protein C16orf70 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24 Identity = 80/223 (35.87%), Postives = 111/223 (49.78%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPA-QYADCCQDREAE--LPLEFPDGTTPVTCRVSIYDGSADKKVGVGSLFDKAIAPSLPI----GSLYMEEVH-----------------AKLGE----ELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII 587 GVY+ ++ L + GLSF+F + + A + A L+ P G T R+ IY G+ SL D AP +P+ G++Y E V A G + V + + FG S QDV + LG P + K D+M IHS S + + C DYF+NY+T G+DILFD THK+KKF++HTNYPGH +FN Y +C F I Sbjct: 118 GVYNSAEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGN--------SLQDTK-APMMPLSCFLGNVYAESVDVIRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKI 329
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: CP070_MOUSE (UPF0183 protein C16orf70 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.120e-24 Identity = 79/221 (35.75%), Postives = 110/221 (49.77%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPA-QYADCCQDREAE--LPLEFPDGTTPVTCRVSIYDGSA--DKKVGVGSLFDKAIAPSLPIGSLYMEEVH-----------------AKLGE----ELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCGDYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFII 587 GVY+ ++ L + GLSF+F + + A + A L+ P G T R+ IY G++ D K V L S +G++Y E V A G + V + + FG S QDV + LG P + K D+M IHS S + + C DYF+NY+T G+DILFD THK+KKF++HTNYPGH +FN Y +C F I Sbjct: 118 GVYNSTEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGNSLQDTKAPVMPL-------SCFLGNVYAESVDVLRDGTGPSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIYHRCEFKI 329
BLAST of FC930094 vs. ExPASy Swiss-Prot
Match: U183_CAEEL (UPF0183 protein T01G9.2 OS=Caenorhabditis elegans GN=T01G9.2 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17 Identity = 66/223 (29.60%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 3 GVYDKEISVYMLFYPGLSFAFPIPAQYADCCQDREAE----LPLEFPDGTTPVTCRVSIYDG-------SADKKVGV--GSLFDKAIAPSLPIGSLYMEEVHAK------LGEELHFTVGSQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRSTLCG--DYFYNYYTRGLDILFDGQTHKIKKFIMHTNYPGHADFNSYIKCNFIILGSDCKF 608 G YD + ++Y+ +PGLSF FP + ++ + R L++ + P ++SIY G S D G + + G++ ++ + E + ++ I FG S DV + LG P + K D+M IH + TL G ++F+NY+ GLDILFD + ++ KF++HTN PGH DF Y +CNF I +D ++ Sbjct: 136 GSYDDKHNIYVQSWPGLSFCFPYGGENSNL-EVRPGFGGNLRSLKYDANSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENGNIVGIDIQFDTQNGRIVDGEYDVSTYTRQIYFGDSVSDVQSILGAPTKVFYKSDDKMKIHRGLH---KETLYGPPNFFFNYFVMGLDILFDFVSKRVVKFVLHTNAPGHCDFGMYSRCNFSIFLNDKQY 354 The following BLAST results are available for this feature:
BLAST of FC930094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930094 ID=FC930094; Name=FC930094; organism=Citrus clementina; type=EST; length=678bpback to top |