FC930106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: KASC1_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 8.065e-60 Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 2 Query: 161 MQSLQSSSLHASPLNPLRSKSN---FNLPNNARPTARRV-SFITAS-STKSAPKREKDPKKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADLGADISKKIDKERA 628 MQ+LQSSSL ASP NPLR SN L NARP R+ SFI+AS ST SAPKRE DPKKRVVITGMGLVSVFGNDVDAYY KLL GESGI++IDRFDASKFPTRFGGQIRGFS+EGYIDGKN+RRLDDCL+YCIVAGKKALE A+LG D IDK +A Sbjct: 1 MQALQSSSLRASPPNPLRLPSNRQSHQLITNARPLRRQQRSFISASASTVSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKA 161
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: KASC1_HORVU (3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.357e-43 Identity = 89/130 (68.46%), Postives = 105/130 (80.77%), Query Frame = 2 Query: 245 ARPTARRVSFITASSTKSAPKREKDPKKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADLGA--DISKKIDKERA 628 ARP R + + A+S +AP+RE DP+KRVVITGMGL SVFG+DVD +Y++LL GESG+ IDRFDAS FPTRF GQIRGFS+EGYIDGKNDRRLDDC+RYCI++GKKALE A LGA D K+D RA Sbjct: 23 ARPRRRPAAAVLATS--AAPQRETDPRKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRA 150
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17 Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 KKRVV+TG+G +S GNDVD +N ++G SGI I R DA ++P + +++ F+ E Y+D K R++D +Y +VA K A+EDADL Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYMDKKEARKMDRFTQYAVVAAKMAVEDADL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TGMG++S GN V++ + LL G+SGI I+ FD + F TRF G ++GF E Y+ K+ R++D ++Y I AG +ALED+ L Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQYMSKKDARKMDLFIQYGIAAGIQALEDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TG+G++S GN V++ + LL G+SGI++ID FD S + T+F G ++ F+ E I K R++D ++Y IVAG +A++D+ L Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TG+G++S GN V++ + LL G+SGI++ID FD S + T+F G ++ F+ E I K R++D ++Y IVAG +A++D+ L Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TG+G++S GN V++ + LL G+SGI++ID FD S + T+F G ++ F+ E I K R++D ++Y IVAG +A++D+ L Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TG+G++S GN V++ + LL G+SGI++ID FD S + T+F G ++ F+ E I K R++D ++Y IVAG +A++D+ L Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16 Identity = 40/89 (44.94%), Postives = 62/89 (69.66%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 K+RVV+TGMG++S GN V++ + LL+G+SGI I+ FDA+ F TRF G ++ F Y+ K+ R++D ++Y I AG +AL+D+ L Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEYMSKKDARKMDLFIQYGIAAGIQALDDSGL 91
BLAST of FC930106 vs. ExPASy Swiss-Prot
Match: FABF_SYNY3 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabF PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14 Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 323 KKRVVITGMGLVSVFGNDVDAYYNKLLDGESGITMIDRFDASKFPTRFGGQIRGFSAEGYIDGKNDRRLDDCLRYCIVAGKKALEDADL 589 KKRVV+TG+G ++ GN + Y+ L++G +GI I RFDAS RFGG+++ F A ++D K +R+D + + A ++A+ DA L Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKL 94 The following BLAST results are available for this feature:
BLAST of FC930106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930106 ID=FC930106; Name=FC930106; organism=Citrus clementina; type=EST; length=731bpback to top |