FC930221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.597e-64 Identity = 129/189 (68.25%), Postives = 146/189 (77.25%), Query Frame = 1 Query: 73 MEVATASAPIFG-LRTRMLATPP------RTSPR---TVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGN 609 MEVA A+A F LR R A P R+ PR + + +LS F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK GEKLGY+TEAFAIYDVMGYVKPPIFTLCVGN Sbjct: 1 MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGN 189
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.914e-25 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 316 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 P+ ++ PPPDL S L K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ G+ +GYETEAFAI D M Y+KPP+ T+C+G Sbjct: 11 PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIG 118
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.482e-24 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 334 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTT-KGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 A++ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY YINSTGT+ G+ +G+ETEAFAI D + Y+KPP+ T+C+G Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIG 116
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.104e-22 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 346 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTK-GGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ GE +G E+E FAIYD + +K + T+CVG Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVG 205
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18 Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 349 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGT-TKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + E +G ETEA+AI D + Y K ++T+ G Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCG 255
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 319 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 ++ + PPPDL S L RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD M +V+ PI T+C+G Sbjct: 16 YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYDTMRHVRMPIKTICLG 105
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCVG Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCVG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCVG Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCVG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LYINS G G T AIYD M YV+ P+ TLCVG Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG--------GVVTAGMAIYDTMQYVRCPVSTLCVG 94
BLAST of FC930221 vs. ExPASy Swiss-Prot
Match: CLPP_GEOUR (ATP-dependent Clp protease proteolytic subunit OS=Geobacter uraniireducens (strain Rf4) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 355 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVG 606 D+ S L K+RIV+LG + +++ L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CVG Sbjct: 18 DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICVG 93 The following BLAST results are available for this feature:
BLAST of FC930221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930221 ID=FC930221; Name=FC930221; organism=Citrus clementina; type=EST; length=653bpback to top |