FC930233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930233 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.105e-15 Identity = 50/149 (33.56%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 33 PLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAV*VLHWIKTTQEHWLIQYADLSS-CFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPSSTDLLW 476 P+I++ HGG + SA++ IY LC V+VSV+YR APEHR P AY D L W+ + + ++ D + F+ GDS GGN+A+H FGG +RTESE RL + + D W Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHH-----VAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYW 255
BLAST of FC930233 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.886e-15 Identity = 52/150 (34.67%), Postives = 70/150 (46.67%), Query Frame = 3 Query: 30 LPLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAV*VLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPSSTDLLW 476 +P+IV+ HGG SA + IY LC + AV+VSV+YR APE+R P AY D VL W+ ++ WL D F+ GDS GGN+ ++ FGG +RTESE RL + + D W Sbjct: 104 VPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS--WLRSKKDSKVRIFLAGDSSGGNIVHN-----VAVRAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYW 246
BLAST of FC930233 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 3 Query: 30 LPLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAV*VLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPSSTDLLW 476 +P++++ HGG SA + IY C + V+VSVDYR +PEHR P AY D L+W+K+ WL D + ++ GDS GGN+A++ FGG +RT+SE L + + D W Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS--RVWLQSGKDSNVYVYLAGDSSGGNIAHN-----VAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYW 248
BLAST of FC930233 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.706e-13 Identity = 48/150 (32.00%), Postives = 67/150 (44.67%), Query Frame = 3 Query: 30 LPLIVYVHGGGLILLSAATKIYHDLCSDIAARVPAVIVSVDYRLAPEHRLPAAYYDAV*VLHWIKTTQEHWLIQYADLS-SCFIMGDSGGGNVAYHXXXXXXXXXXXXXXXXXXXXXXXXXFFGGVKRTESELRLANQPILPPSSTDLLW 476 +P+I++ HGG SA + IY LC + V+VSV+YR APE+ P AY D L+W+ + WL D F+ GDS GGN+A++ FGG +RTESE L + + D W Sbjct: 106 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS--RSWLKSKKDSKVHIFLAGDSSGGNIAHN-----VALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYW 248 The following BLAST results are available for this feature:
BLAST of FC930233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930233 ID=FC930233; Name=FC930233; organism=Citrus clementina; type=EST; length=478bpback to top |