FC930252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.227e-89 Identity = 162/243 (66.67%), Postives = 191/243 (78.60%), Query Frame = 3 Query: 12 HTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYGLILRAHLITLLKKKAFLPTPKSNCHDAFSQFSAVDFAK 740 +TNDDAI+NLFSK+TD EF + S+L+FFVTCF LS+ SYGIVAPAGLFVP IVTGASYGRFVGML+GS+SNLNHGL+AVLGAASFLGG+MRMTVS CV SKTVAD FN NIY+LIMK KGFPYL +H EPYMRQL VGDVVT PLQ+F+GIEK +VHVL+TT HNGFPV+D PL+ P+L+GLILRAH++TLLKK+ F+P+P + + SQF A +FAK Sbjct: 415 NTNDDAIKNLFSKNTDFEFHYFSVLVFFVTCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLLGSNSNLNHGLFAVLGAASFLGGTMRMTVSTCVILLELTNNLLLLPMMMVVLLISKTVADGFNANIYNLIMKLKGFPYLYSHAEPYMRQLLVGDVVTGPLQVFNGIEKVETIVHVLKTTNHNGFPVVDGPPLAAAPVLHGLILRAHILTLLKKRVFMPSPVACDSNTLSQFKAEEFAK 657
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 9.124e-59 Identity = 118/244 (48.36%), Postives = 151/244 (61.89%), Query Frame = 3 Query: 9 IHTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYGLILRAHLITLLKKKAFLPTPKSNCHDAFSQFSAVDFAK 740 ++TNDDAIRNLF+ ++ EF S++ IFFV + L +++YGI P+GLF+P I+ GASYGR VG L+G S L+ GL+++LGAASFLGG+MRMTVSLCV SKTVAD FN +YD I+ KG PY+E H EPYMR L DVV+ L F +EK G + L+ TRHNGFPVIDE P +E L G+ LR+HL+ LL+ K F + A DF K Sbjct: 442 LNTNDDAIRNLFTSRSENEFHISTLAIFFVAVYCLGIITYGIAIPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDHAEPYMRNLVAKDVVSGALISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASELCGIALRSHLLVLLQGKKFSKQRTTFGSQILRSCKARDFGK 685
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCB_ARATH (Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.767e-54 Identity = 109/229 (47.60%), Postives = 150/229 (65.50%), Query Frame = 3 Query: 15 TNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTA--PLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPI------LYGLILRAHLITLLKKKAFL 677 TNDDA+RNLFS +T EF S+ IFFV L + ++GI P+GLF+P I+ GA+YGR +G +GS+++++ GLYAVLGAA+ + GSMRMTVSLCV +KTV D+FN +IYD+I+ KG P+LE + EP+MR LTVG++ A P+ G+EK N+V VL+ T HN FPV+DE + + + L+GLILRAHL+ +LKK+ FL Sbjct: 433 TNDDAVRNLFSSNTPNEFGMGSLWIFFVLYCILGLFTFGIATPSGLFLPIILMGAAYGRMLGAAMGSYTSIDQGLYAVLGAAALMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYDIILHLKGLPFLEANPEPWMRNLTVGELGDAKPPVVTLQGVEKVSNIVDVLKNTTHNAFPVLDEAEVPQVGLATGATELHGLILRAHLVKVLKKRWFL 661
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCA_ARATH (Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 3.358e-53 Identity = 107/223 (47.98%), Postives = 148/223 (66.37%), Query Frame = 3 Query: 15 TNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTA--PLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYGLILRAHLITLLKKKAFL 677 TNDDA+RN+FS +T EF S+ IFF L ++++GI P+GLF+P I+ G++YGR +G +GS++N++ GLYAVLGAAS + GSMRMTVSLCV +KTV D+FN +IY++I+ KG P+LE + EP+MR LTVG++ A P+ +G+EK N+V VLR T HN FPV+D + L+GLILRAHL+ +LKK+ FL Sbjct: 434 TNDDAVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSGLFLPIILMGSAYGRMLGTAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELNDAKPPVVTLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELHGLILRAHLVKVLKKRWFL 656
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41 Identity = 101/248 (40.73%), Postives = 142/248 (57.26%), Query Frame = 3 Query: 12 HTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLV---GSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQL-FHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYGLILRAHLITLLKKK-----AFLPTPKS--NCHDAFSQFS 722 +T DDAIRNLFS T +EF S+L F ++L+V+++G PAG FVP I+ G++YGR VGM V N+ G YA+LGAASFLGGSMRMTVSLCV SK V DAFN +Y++ + KG P LE+ + +MRQ+ + + + + + +V +L + +HNGFPVID ET ++ GL+LR+HL+ LL+ K + LP S N +FS+F+ Sbjct: 428 NTQDDAIRNLFSAKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNGFPVIDHTRSGET-LVIGLVLRSHLLVLLQSKVDFQHSPLPCDPSARNIRHSFSEFA 674
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCN6_HUMAN (Chloride transport protein 6 OS=Homo sapiens GN=CLCN6 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27 Identity = 72/205 (35.12%), Postives = 110/205 (53.66%), Query Frame = 3 Query: 21 DDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNH---GLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYG 626 + AI LF +D F ++ +FFV F L+ +YGI P+GLFVP+++ GA++GR V ++ S+ L H G +A++GAA+FLGG +RMT+SL V +K D FN IYD+ + +G P LE E M +L D++ L + + ++V +LRTT H+ FPV+ EN +E + G Sbjct: 447 ESAILQLFHQDGT--FSPVTLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIYSGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDFFNKGIYDIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPVVTENRGNEKEFMKG 649
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCN6_RABIT (Chloride transport protein 6 OS=Oryctolagus cuniculus GN=CLCN6 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26 Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 3 Query: 21 DDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNH---GLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYG 626 + AI LF +D F ++ +FFV F L+ +YGI P+GLFVP+++ GA++GR V ++ S+ L+H G ++++GAA+ LGG +RMT+SL V +K D FN IYD+ + +G P LE E M +L D++ L + + ++V +LRTT H+ FPV+ EN +E + G Sbjct: 447 ESAILQLFHQDGT--FSPITLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLSHIYSGTFSLIGAAALLGGVVRMTISLTVILIESTNEITYGLPIMITLMVAKWTGDFFNKGIYDIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPVVTENRGNEKEFMKG 649
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCN6_MOUSE (Chloride transport protein 6 OS=Mus musculus GN=Clcn6 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.796e-26 Identity = 68/208 (32.69%), Postives = 111/208 (53.37%), Query Frame = 3 Query: 12 HTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGMLVGSHSNLNH---GLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTTRHNGFPVIDENPLSETPILYG 626 ++ + AI LF +D F ++ +FF+ F L+ ++G P+GLFVP+++ GA++GR V ++ S+ L H G +A++GAA+FLGG +RMT+SL V +K D FN IYD+ + +G P LE + M +L D++ L + + ++V +LRTT H+ FPV+ EN +E + G Sbjct: 445 NSQESAILQLFHQDGT--FSPVTLALFFILYFLLACWTFGTSVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHLYSGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDLFNKGIYDVHIGLRGVPLLEWETDVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPVVTENRGNEKEFMKG 650
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25 Identity = 72/228 (31.58%), Postives = 121/228 (53.07%), Query Frame = 3 Query: 12 HTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGM----LVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTT--RHNGFPVIDENPLSETPILYGLILRAHLITLLKKKAFL 677 +T + ++ +LF D + ++ +F + F L+ +YG+ AG+F+P+++ GA++GR G+ + G+ + G YA++GAA+ LGG +RMT+SL V +K V D F +YD+ ++ + P+L LT +V++ P+ EK G +V VL +T HNGFPV+++ ++ L GLILR+ LI LLK K F+ Sbjct: 472 NTPEKSVVSLFH-DPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYITGAAVWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSSVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSSTASNHNGFPVVEDADGTQPARLQGLILRSQLIVLLKHKVFV 698
BLAST of FC930252 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.737e-25 Identity = 73/228 (32.02%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 12 HTNDDAIRNLFSKDTDKEFQHSSMLIFFVTCFSLSVLSYGIVAPAGLFVPAIVTGASYGRFVGM----LVGSHSNLNHGLYAVLGAASFLGGSMRMTVSLCVXXXXXXXXXXXXXXXXXXXXXSKTVADAFNGNIYDLIMKAKGFPYLETHVEPYMRQLTVGDVVTAPLQLFHGIEKAGNVVHVLRTT--RHNGFPVIDENPLSETPILYGLILRAHLITLLKKKAFL 677 +T + ++ +LF D + ++ +F + F L+ +YG+ AG+F+P+++ GA++GR G+ L G+ + G YA++GAA+ LGG +RMT+SL V +K V D F +YD+ ++ + P+L LT +V++ P+ EK G +V VL T HNGFPV+++ ++ L GLILR+ LI LLK K F+ Sbjct: 466 NTPEKSVVSLFH-DPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISMSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTPVTCLRRREKVGIIVDVLSDTASNHNGFPVVEDVGDTQPARLQGLILRSQLIVLLKHKVFV 692 The following BLAST results are available for this feature:
BLAST of FC930252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930252 ID=FC930252; Name=FC930252; organism=Citrus clementina; type=EST; length=740bpback to top |