FC930287

Overview
NameFC930287
Unique NameFC930287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930287_ssr5 microsatellite FC930287_ssr5:5..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_ORYSJ (Adenylate kinase B OS=Oryza sativa subsp. japonica GN=ADK-B PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.180e-86
Identity = 161/198 (81.31%), Postives = 171/198 (86.36%), Query Frame = 2
Query:   86 SSAANLEDVPSVDLMTELLRRMKCASKPDKRLILVEMSLTNDSSH*LDVCIH*IIVWLAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            ++AANLEDVPS+DLM ELLRRMKC+SKPDKRLILV                        GPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLG+KAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRT VQAQKLDEMLEK+G KVDKVLNFAIDD++LEERITGRWIHPSSGR+YHTKFAPP+
Sbjct:    2 AAAANLEDVPSMDLMNELLRRMKCSSKPDKRLILV------------------------GPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAIDDSILEERITGRWIHPSSGRSYHTKFAPPK 175          

HSP 2 Score: 22.7126 bits (47), Expect = 1.180e-86
Identity = 12/19 (63.16%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  661 KICSSKVPGVDDVVNVTGE 717
            K    KVPGVDD   VTGE
Sbjct:  170 KFAPPKVPGVDD---VTGE 185          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD1_ORYSJ (Adenylate kinase A OS=Oryza sativa subsp. japonica GN=ADK-A PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.942e-84
Identity = 157/196 (80.10%), Postives = 167/196 (85.20%), Query Frame = 2
Query:   92 AANLEDVPSVDLMTELLRRMKCASKPDKRLILVEMSLTNDSSH*LDVCIH*IIVWLAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            AANLEDVPS++LMTELLRRMKC+SKPDKR+ILV                        GPPG GKGTQSP+IKDE+CLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKK SCQKGFILDGFPRT VQAQKLDEML KQG K+DKVLNFAIDDA+LEERITGRWIHPSSGR+YHTKFAPP+
Sbjct:    2 AANLEDVPSMELMTELLRRMKCSSKPDKRVILV------------------------GPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPK 173          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_ARATH (Adenylate kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.799e-80
Identity = 147/203 (72.41%), Postives = 169/203 (83.25%), Query Frame = 2
Query:   77 MASSSAAN--LEDVPSVDLMTELLRRMKCASKPDKRLILVEMSLTNDSSH*LDVCIH*IIVWLAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            MA+SSAA+  +ED+ +VDLM+ELLRRMKCASKPDKRL+ +                        GPPGSGKGTQSP+IKDE+CLCHL+TGDMLRAAVAAKTPLG+KAKEAMDKGELVSDDLVVGI+DEAM +P CQKGFILDGFPRT  QA+KLDEML ++G ++DKVLNFAIDD+VLEERITGRWIHPSSGR+YHTKFAPP+
Sbjct:    1 MATSSAASVDMEDIQTVDLMSELLRRMKCASKPDKRLVFI------------------------GPPGSGKGTQSPVIKDEFCLCHLSTGDMLRAAVAAKTPLGVKAKEAMDKGELVSDDLVVGIMDEAMNRPKCQKGFILDGFPRTVTQAEKLDEMLNRRGAQIDKVLNFAIDDSVLEERITGRWIHPSSGRSYHTKFAPPK 179          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD1_ARATH (Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=2 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.584e-79
Identity = 143/197 (72.59%), Postives = 165/197 (83.76%), Query Frame = 2
Query:   89 SAANLEDVPSVDLMTELLRRMKCASKPDKRLILVEMSLTNDSSH*LDVCIH*IIVWLAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            +AA+LEDV +VDLM+ELLRR+KC+ KPDKRLI +                        GPPGSGKGTQSP++KDEYCLCHL+TGDMLRAAVA+KTPLG+KAKEAM+KGELVSDDLVVGIIDEAM KP CQKGFILDGFPRT  QA+KLDEML+++G ++DKVLNFAIDDA+LEERITGRWIHPSSGR+YHTKFAPP+
Sbjct:    6 AAADLEDVQTVDLMSELLRRLKCSQKPDKRLIFI------------------------GPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSDDLVVGIIDEAMNKPKCQKGFILDGFPRTVTQAEKLDEMLKRRGTEIDKVLNFAIDDAILEERITGRWIHPSSGRSYHTKFAPPK 178          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_AEDAE (Adenylate kinase 2, mitochondrial OS=Aedes aegypti GN=Adk2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.862e-48
Identity = 86/141 (60.99%), Postives = 116/141 (82.27%), Query Frame = 2
Query:  257 LAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            L GPPGSGKGTQ+P++K+++C+CHL+TGDMLRA +AA + LG + K+ MD+G+LVSDDLVV +ID  + KP C+ GF+LDGFPRT VQA+KLD++LEK+   +D V+ F IDD++L  RITGR IH +SGR+YH +FAPP+
Sbjct:   24 LLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIAAGSKLGAQLKKVMDEGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDDLLEKRKTGLDAVVEFGIDDSLLVRRITGRLIHQASGRSYHEEFAPPK 164          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_DROMO (Adenylate kinase 2, mitochondrial OS=Drosophila mojavensis GN=Adk2 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.962e-48
Identity = 86/141 (60.99%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  257 LAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            L GPPGSGKGTQ+P++K+++C+CHL+TGDMLRA +A+ + LG + K+ MD+G+LVSDDLVV +ID  + KP C+ GF+LDGFPRT VQAQKLD +L+K+   +D V+ FAIDD +L  RITGR IH +SGR+YH +FAPP+
Sbjct:   23 LLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIASGSKLGAELKKVMDEGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAQKLDSLLDKRKTSLDAVIEFAIDDNLLVRRITGRLIHQASGRSYHEEFAPPK 163          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_DICDI (Adenylate kinase 2, mitochondrial OS=Dictyostelium discoideum GN=adkA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.170e-47
Identity = 86/139 (61.87%), Postives = 114/139 (82.01%), Query Frame = 2
Query:  263 GPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            GPPGSGKGTQ+P++K++YCLCHL+TGDMLRAA+   T  G +AK  MD+G LV D+++V +I E ++ P C+KGFILDGFPRT  QA+KLD+ML +  KK+D VL+FAIDD++L +RITGR +HPSSGR+YH +F PP+
Sbjct:   35 GPPGSGKGTQAPLVKEDYCLCHLSTGDMLRAAIEQGTETGKQAKTIMDQGGLVPDEVMVNMIKENIQTPECKKGFILDGFPRTVPQAEKLDKMLAEDNKKIDHVLDFAIDDSLLVKRITGRLVHPSSGRSYHREFFPPK 173          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_ANOGA (Adenylate kinase 2, mitochondrial OS=Anopheles gambiae GN=Adk2 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.170e-47
Identity = 85/141 (60.28%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  257 LAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            L GPPGSGKGTQ+P++K++YC+CHL+TGDMLRA +A+ + LG + K+ MD+G+LVSD+LVV +ID  + KP C+ GF+LDGFPRT VQA+KLD +LEK+   +D V+ F IDD++L  RITGR IH +SGR+YH +FAPP+
Sbjct:   23 LLGPPGSGKGTQAPLLKEKYCVCHLSTGDMLRAEIASGSKLGAQLKKVMDEGKLVSDELVVDMIDSNLDKPECRNGFLLDGFPRTVVQAEKLDNLLEKRNTGLDAVIEFGIDDSLLVRRITGRLIHQASGRSYHEEFAPPK 163          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_DROPS (Adenylate kinase 2, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=Adk2 PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.406e-47
Identity = 84/141 (59.57%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  257 LAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            L GPPGSGKGTQ+P++K++YC+CHL+TGDMLRA +++ + LG + K+ MD G+LVSD+LVV +ID  + KP C+ GF+LDGFPRT VQA+KLD +L+K+   +D V+ FAIDD++L  RITGR IH +SGR+YH +FAPP+
Sbjct:   23 LLGPPGSGKGTQAPLLKEKYCVCHLSTGDMLRAEISSGSKLGTELKKVMDAGKLVSDELVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDSLLDKRKANLDAVIEFAIDDSLLVRRITGRLIHQASGRSYHEEFAPPK 163          
BLAST of FC930287 vs. ExPASy Swiss-Prot
Match: KAD2_DROME (Adenylate kinase 2, mitochondrial OS=Drosophila melanogaster GN=Adk2 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.448e-47
Identity = 84/141 (59.57%), Postives = 115/141 (81.56%), Query Frame = 2
Query:  257 LAGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPR 679
            L GPPGSGKGTQ+P++K+++C+CHL+TGDMLRA +++ + LG + K+ MD G+LVSDDLVV +ID  + KP C+ GF+LDGFPRT VQA+KLD +L+K+   +D V+ FAIDD++L  RITGR IH +SGR+YH +FAPP+
Sbjct:   23 LLGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGRLIHQASGRSYHEEFAPPK 163          
The following BLAST results are available for this feature:
BLAST of FC930287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD2_ORYSJ1.180e-8681.31Adenylate kinase B OS=Oryza sativa subsp. japonica... [more]
KAD1_ORYSJ5.942e-8480.10Adenylate kinase A OS=Oryza sativa subsp. japonica... [more]
KAD2_ARATH6.799e-8072.41Adenylate kinase 2 OS=Arabidopsis thaliana GN=ADK2... [more]
KAD1_ARATH2.584e-7972.59Adenylate kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
KAD2_AEDAE6.862e-4860.99Adenylate kinase 2, mitochondrial OS=Aedes aegypti... [more]
KAD2_DROMO8.962e-4860.99Adenylate kinase 2, mitochondrial OS=Drosophila mo... [more]
KAD2_DICDI1.170e-4761.87Adenylate kinase 2, mitochondrial OS=Dictyostelium... [more]
KAD2_ANOGA1.170e-4760.28Adenylate kinase 2, mitochondrial OS=Anopheles gam... [more]
KAD2_DROPS3.406e-4759.57Adenylate kinase 2, mitochondrial OS=Drosophila ps... [more]
KAD2_DROME4.448e-4759.57Adenylate kinase 2, mitochondrial OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionC34005H01EF PostHarvC1 Citrus clementina cDNA clone C34005H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930287 ID=FC930287; Name=FC930287; organism=Citrus clementina; type=EST; length=718bp
GAGACTCTCTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAA
AACCCTAAACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAAC
CTGGAAGATGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCAT
GAAGTGCGCCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGAGATGAGTT
TGACTAATGATTCAAGTCATTAGTTAGATGTTTGTATCCATTAGATTATT
GTCTGGTTGGCAGGCCCACCCGGATCAGGAAAGGGTACTCAATCGCCCAT
CATTAAAGATGAATATTGCTTGTGTCACTTGGCTACTGGTGATATGTTGA
GAGCCGCTGTTGCTGCTAAAACTCCTCTTGGGATCAAGGCTAAGGAGGCT
ATGGACAAGGGAGAACTTGTTTCTGATGACTTGGTTGTTGGTATCATAGA
TGAAGCAATGAAGAAACCTTCTTGTCAGAAAGGTTTCATTCTTGACGGGT
TTCCCAGAACTGAGGTCCAAGCTCAGAAGCTGGACGAGATGCTTGAGAAG
CAGGGAAAAAAAGTTGATAAGGTTCTCAACTTTGCTATTGATGATGCGGT
TTTGGAAGAGAGGATTACTGGTCGCTGGATCCACCCTTCAAGTGGCAGGA
CCTACCACACAAAATTTGCTCCTCCAAGGTTCCTGGTGTTGACGATGTAG
TCAATGTAACTGGAGAAC
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