FC930392

Overview
NameFC930392
Unique NameFC930392
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC930392_ssr121 microsatellite FC930392_ssr121:121..130. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15141 contig Ccv1_Contig15141:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_POPTM (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.033e-64
Identity = 114/147 (77.55%), Postives = 136/147 (92.52%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+C+KE+RE+T KHPW+ M T+ DE QFL+MLLKL+NAKNTMEIGV+TGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D KYHG+FDF+FVDADK+NYI   +RLI
Sbjct:   31 QYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYINYHKRLI 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT2_POPTR (Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.005e-64
Identity = 114/147 (77.55%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+C+KE+RELT KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAG+ HKI+F+EGPALP+LDQ+I+D KYHGT+DF+FVDADK+NYI   +RLI
Sbjct:   31 QYILETSVYPREPECMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGLEHKIEFKEGPALPVLDQMIEDGKYHGTYDFIFVDADKDNYINYHKRLI 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_VITVI (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.694e-64
Identity = 114/147 (77.55%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RELT +HPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI KE+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D KYHG+FDF+FVDADK+NY+   +RLI
Sbjct:   26 QYILETSVYPREPESMKELRELTAQHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYLNYHKRLI 172
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT2_EUCGL (Caffeoyl-CoA O-methyltransferase 2 OS=Eucalyptus globulus GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.743e-64
Identity = 114/147 (77.55%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI +E++E GLP+I+KAG+AHKIDFREGPALPLLDQL+QDEK HGT+DF+FVDADK+NYI   +RLI
Sbjct:   31 QYILETSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENFEIGLPVIEKAGLAHKIDFREGPALPLLDQLVQDEKNHGTYDFIFVDADKDNYINYHKRLI 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT1_POPTR (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.142e-63
Identity = 113/147 (76.87%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+C+KE+RE+T KHPW+ M T+ DE QFL+MLLKL+NAKNTMEIGV+TGYSLLATALAIP+DGKILA+DI +E+YE GLP+IQKAGVAHKIDF+EGPALP+LDQ+I+D K HG+FDF+FVDADK+NYI   +RLI
Sbjct:   31 QYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKCHGSFDFIFVDADKDNYINYHKRLI 177
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_PETCR (Caffeoyl-CoA O-methyltransferase OS=Petroselinum crispum PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63
Identity = 114/147 (77.55%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALA+PDDGKILA+DI +E+YE GLPII+KAGV HKIDFREGPALP+LD +++D KYHGTFDFVFVDADK+NYI   +RLI
Sbjct:   25 QYILETSVYPREPEAMKELREVTAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEIGLPIIEKAGVGHKIDFREGPALPVLDHMLEDGKYHGTFDFVFVDADKDNYINYHKRLI 171
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_SOLTU (Caffeoyl-CoA O-methyltransferase OS=Solanum tuberosum GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.322e-63
Identity = 111/147 (75.51%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLP+I+KAG+AHKIDFREGPALP+LDQ+I+D KYHG++DF+FVDADK+NY+   +RLI
Sbjct:   26 QYILETSVYPREPEAMKELREITAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIDFREGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLI 172
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT_ZINEL (Caffeoyl-CoA O-methyltransferase OS=Zinnia elegans GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.667e-63
Identity = 114/147 (77.55%), Postives = 134/147 (91.16%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREPQ +KE+R +T KHPW+ M T+ DE QFL++LLKLINAKNTMEIGV+TGYSLL+TALA+P+DGKILALDI +E+YE GLPIIQKAGVAHKIDFREGPALPLLDQ++QDEK HG+FDF+FVDADK+NY+   +RLI
Sbjct:   29 QYILETSVYPREPQPMKELRRITAKHPWNLMTTSADEGQFLNLLLKLINAKNTMEIGVYTGYSLLSTALALPEDGKILALDINRENYEIGLPIIQKAGVAHKIDFREGPALPLLDQMLQDEKCHGSFDFIFVDADKDNYLNYHKRLI 175
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT5_TOBAC (Caffeoyl-CoA O-methyltransferase 5 OS=Nicotiana tabacum GN=CCOAOMT5 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.667e-63
Identity = 113/147 (76.87%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFL+MLLKLINAKNTMEIGV+TGYSLLATALAIPDDGKILA+DI +E+YE GLPII+KAGVAHKI+FREGPALP+LDQL++D+K HGT+DF+FVDADK+NYI   +R+I
Sbjct:   24 QYILETSVYPREPESMKELREVTAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALAIPDDGKILAMDINRENYEIGLPIIEKAGVAHKIEFREGPALPVLDQLVEDKKNHGTYDFIFVDADKDNYINYHKRII 170
[Close]
BLAST of FC930392 vs. ExPASy Swiss-Prot
Match: CAMT2_TOBAC (Caffeoyl-CoA O-methyltransferase 2 OS=Nicotiana tabacum GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.813e-62
Identity = 112/147 (76.19%), Postives = 134/147 (91.16%), Query Frame = 1 
Query:  265 QYILETSVYPREPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYIKLPQRLI 705
            QYILETSVYPREP+ +KE+RE+T KHPW+ M T+ DE QFLSMLLKLINAKNTMEIGVFTGYSLLATA+A+PDDGKILA+DI +E+YE GLPII+KAG+AHKI FREGPALP+LDQ+I+D KYHG++DF+FVDADK+NY+   +RLI
Sbjct:   26 QYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPIIEKAGLAHKIVFREGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLI 172
The following BLAST results are available for this feature:
BLAST of FC930392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_POPTM1.033e-6477.55Caffeoyl-CoA O-methyltransferase OS=Populus tremul... [more]
CAMT2_POPTR3.005e-6477.55Caffeoyl-CoA O-methyltransferase 2 OS=Populus tric... [more]
CAMT_VITVI6.694e-6477.55Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera... [more]
CAMT2_EUCGL8.743e-6477.55Caffeoyl-CoA O-methyltransferase 2 OS=Eucalyptus g... [more]
CAMT1_POPTR1.142e-6376.87Caffeoyl-CoA O-methyltransferase 1 OS=Populus tric... [more]
CAMT_PETCR2.544e-6377.55Caffeoyl-CoA O-methyltransferase OS=Petroselinum c... [more]
CAMT_SOLTU3.322e-6375.51Caffeoyl-CoA O-methyltransferase OS=Solanum tubero... [more]
CAMT_ZINEL5.667e-6377.55Caffeoyl-CoA O-methyltransferase OS=Zinnia elegans... [more]
CAMT5_TOBAC5.667e-6376.87Caffeoyl-CoA O-methyltransferase 5 OS=Nicotiana ta... [more]
CAMT2_TOBAC2.813e-6276.19Caffeoyl-CoA O-methyltransferase 2 OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC34007A11EF PostHarvC1 Citrus clementina cDNA clone C34007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930392 ID=FC930392; Name=FC930392; organism=Citrus clementina; type=EST; length=705bp
GATGGTATTCTGTAAGTAATGGCTGCGAATCGGGAAGGTCAGGAGGAAAA
CAAGGATCGTTACTACAAAACTCTACATGGGAACAAGACCCTTTTACAGA
GTGAAAAACTTTATGAGGTGTATATATATACATACAAATTAAAACTACAC
ACTCTTTTTAATTTTCTGTTTCTTTAATTTAACTAAAATGTAGAATGGAA
TGTCTCAATTATGCCGGCTATTATAATTTCTCTATCTTGATTTCTTCTTA
TTAATTATATCTTGCAGTATATACTTGAAACCAGTGTATATCCAAGAGAA
CCACAATGCTTGAAGGAGATCCGCGAGTTGACGGACAAGCATCCATGGAG
CGCCATGATGACTGCACCTGATGAAGCACAATTTTTGAGCATGCTACTCA
AGCTTATCAATGCCAAGAATACCATGGAAATTGGCGTTTTCACTGGTTAC
TCTCTCCTAGCCACTGCCCTCGCCATTCCCGACGATGGCAAGATACTGGC
CCTGGACATCACCAAGGAACACTACGAGAAGGGTCTCCCTATAATTCAAA
AAGCTGGTGTTGCCCACAAGATTGATTTCAGAGAAGGCCCTGCTCTTCCT
CTTCTTGATCAATTGATCCAAGACGAAAAATATCATGGGACATTCGACTT
CGTCTTTGTTGATGCTGACAAGAATAACTACATTAAATTACCACAGAGGC
TTATT
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