FC930407

Overview
NameFC930407
Unique NameFC930407
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14110 contig Ccv1_Contig14110:1..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930407 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.351e-42
Identity = 95/220 (43.18%), Postives = 129/220 (58.64%), Query Frame = 2
Query:   62 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVXELEQRSL 721
            +++ G R+ILFPLP QG INPMLQLANIL+ +GFSIT+IHT+FN+P  S++P FTF  I DGLSETE      ++L++ +++   +PF+DCL K+L   E KE E + CLI D  W FT  V+ESLK                         KGY P+ +S + E  VPE PPL+ +D+  +   + E L  F    +     SSG I+ S  ELE+ SL
Sbjct:    3 EKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPLFTFLQIPDGLSETEIQ-DGVMSLLAQINLNAESPFRDCLRKVL--LESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSES-EAEDSVPEFPPLQKRDLSKVFGEFGEKLDPFLHAVVETTIRSSGLIYMSCEELEKDSL 218          
BLAST of FC930407 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.663e-41
Identity = 92/226 (40.71%), Postives = 135/226 (59.73%), Query Frame = 2
Query:   59 MQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEK--EEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVI--ETLYQETLHQFAAEAINQMKASSGCIWNSVXELEQRSLA 724
            M+++  R++ILFPLP QG INPMLQLA ILYS+GFSITIIHT+FN+P  S++P FTF  I+DGLSE++  + D +  +++L+  C  PF++CLAKL+  + +   E+  I+C+I D+ W FT  VAES                          ++G+ P+ DS + +  VPE PPLR KD+  I   +   + L  +  + ++  K +SG I  S  EL+  SLA
Sbjct:    1 MEKRNERQVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPLFTFLQIRDGLSESQTQSRDLLLQLTLLNNNCQIPFRECLAKLIKPSSDSGTEDRKISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDS-EADDLVPEFPPLRKKDLSRIMGTSAQSKPLDAYLLKILDATKPASGIIVMSCKELDHDSLA 225          
BLAST of FC930407 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 68/243 (27.98%), Postives = 111/243 (45.68%), Query Frame = 2
Query:   44 LGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN---------SPNPSNYPHFTFCSIQDGLSETEA-STTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAP---------VPELPPLRMKDIP--VIETLYQETLHQFAAEAINQMKASSGCIWNSVXELE 709
            +G   +   +   ++  P P QGHINPM+++A +L+++GF +T ++T +N         S      P F F SI DGL ET+  +T D  AL       C APF++ L ++  NA +    P++C+++D    FT DVAE L                         +KG  P++D   L            +P +  +++KDIP  +  T   + +  FA     + K +S  I N+  +LE
Sbjct:    1 MGSQIIHNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRI--NAGD-NVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLE 240          
BLAST of FC930407 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 56/239 (23.43%), Postives = 96/239 (40.17%), Query Frame = 2
Query:   83 LILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN-------------SPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDS------HDLEAP---VPELPPLRMKDIPVI-------ETLYQETLHQFAAEAINQMKASSGCIWNSVXELEQ 712
            ++L P P QGH+ P++QLA +L+++G  +T ++T++N              P  ++   F    I DGLS       D   L+  L   C  PF+  L +L    E ++  P+ C++ D    F    A                            ++G  P +D+        L+ P   VP +  +R++D+P         + +   TL Q  + A      S   I N++ ELE+
Sbjct:   13 VVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLS-LSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQMESAA-----GSKALILNTLYELEK 245          
The following BLAST results are available for this feature:
BLAST of FC930407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CNGT2_ARATH3.351e-4243.18Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH1.663e-4140.71Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
COGT2_ARATH2.337e-1927.98Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI8.051e-1223.43Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionC34007C03EF PostHarvC1 Citrus clementina cDNA clone C34007C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930407 ID=FC930407; Name=FC930407; organism=Citrus clementina; type=EST; length=725bp
GNGAACAACAGAGCAAAGCCAAAAACAAGATTCAATGGAGAACCTCGGAG
AGTCTCACATGCAACAAAAGAAAGGAAGAAGATTGATACTCTTTCCGCTG
CCTTTTCAAGGCCACATAAACCCAATGCTTCAGCTTGCAAACATTCTCTA
TTCAAAAGGCTTTTCAATCACCATAATCCACACCAAATTCAACTCCCCGA
ATCCCTCAAACTACCCTCACTTCACCTTCTGTTCAATCCAAGACGGCTTG
TCAGAAACTGAAGCCTCTACCACGGATTTTGTGGCCCTTATTTCAGTACT
GCATGTTAAGTGTGCTGCGCCATTTCAGGATTGCTTGGCCAAGTTGCTGT
CAAATGCTGAGGAGAAGGAAGAAGAGCCTATTGCTTGCTTAATCACAGAT
GCTAGTTGGTTCTTCACTCATGATGTTGCTGAAAGCCTAAAGCTCCCCAG
GATTGTGTTAAGGAGTCTCAGTGTCTCTTCCTCTCTTGTTTATGCTGCCT
TACCAGTTCTAAGCCAAAAGGGTTACTTTCCCATACAAGATTCTCATGAT
TTGGAAGCCCCAGTGCCAGAGCTTCCGCCTCTAAGAATGAAAGACATTCC
TGTCATTGAAACGCTTTATCAAGAGACACTGCATCAATTTGCAGCAGAAG
CAATCAATCAGATGAAGGCTTCCTCAGGATGCATATGGAATTCAGTTCAN
GAACTTGAACAAAGATCTCTTGCTA
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