FC930415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930415 vs. ExPASy Swiss-Prot
Match: YGI3_SCHPO (Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe GN=SPBC2A9.03 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23 Identity = 64/186 (34.41%), Postives = 97/186 (52.15%), Query Frame = 2 Query: 26 FMASNNDCGVRDFDMERFQLSKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLYFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDRNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRTYGSLLQYNR 583 F+ ND V D++R + VN L + L ++ D+ + +L+D ++ L H +WHP+G I ATG QD T +VWD+R L KS L + A+ ++ F+ +A+ E ADFV ++D K F Q IDFFGEI+G +S ++LFIGV D G +L++ R Sbjct: 233 FILGCNDGAVYVEDVQRTSPILVYRCSNAVNCVQLFDETPLALVCTDSKDAMLIDIRSNSVSAKL-PHSDSVLTGSWHPNGNILATGGQDTTAKVWDIRALGKSFRNLGSQMSAVTNLCFSPLGESLAVTEQADFVQLFDTKL-FNTSQVIDFFGEIAGTAYSSSGDSLFIGVDDPMLGGILEFRR 416
BLAST of FC930415 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12 Identity = 52/188 (27.66%), Postives = 88/188 (46.81%), Query Frame = 2 Query: 5 SPSGGIHFMASNNDCGVRDFDMERFQL----SKHFSFPWPVNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLYFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDRNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 556 SP G + + DC VR ++++ +L H ++ V SPDG++L G + L + G I L GH + F+ A+HPDG A+ + DKT ++WD+++ + L G+ +R + F+ D N +A + + ++D G G + + FS D + L G DRT Sbjct: 651 SPEGQL-LATCDTDCHVRVWEVKSGKLLLICRGHSNW---VRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQD-GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRT 833
BLAST of FC930415 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12 Identity = 42/148 (28.38%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 113 VNHTSLSPDGKLLVIVGDNPEGILVDSQTGKAIMPLCGHLYFSFASAWHPDGRIFATGNQDKTCRVWDVRNLSKSVAVLKGNLGAIRSIRFTSDRNFMAMAEPADFVHVYDAKNGFEKEQEIDFFGEISGMTFSPDTEALFIGVWDRT 556 VN ++ SPDG+ L+ D+ + +++G+ + L GH + + PDGR+ A+ + D + R+WDV SK + VLKG+ ++ ++ F+ D +A V++ ++G + I FSP +++L G WD T Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVAR-SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST 175 The following BLAST results are available for this feature:
BLAST of FC930415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930415 ID=FC930415; Name=FC930415; organism=Citrus clementina; type=EST; length=734bpback to top |