FC930477
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 8.065e-83 Identity = 153/195 (78.46%), Postives = 168/195 (86.15%), Query Frame = 1 Query: 118 EQDHLLPLLADDREERAYDPTEKVVVIXXXXXXXXNLST----APPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVFAV 690 E + L + ++ EE AYD TEKV ++ APPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQ+GA+AGYSLLWLL+WATA+GLLVQLLSARLGVATGRHLAELCR+EYP+WARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLW+GVVITALDCF+FLFLENYG+RKL AVFAV Sbjct: 5 ENNEPLLINEEEEEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFLFLENYGIRKLEAVFAV 199
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.521e-81 Identity = 149/195 (76.41%), Postives = 169/195 (86.67%), Query Frame = 1 Query: 118 EQDHLLPLLADDREERAYDPTEKVVVIXXXXXXXXNLS----TAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVFAV 690 E D PLLA EERAY+ TEKV+++ + +P FSWKKLWLFTGPGFLMSIAFLDPGNLE DLQ+GAIAGYSL+WLL+WATA+GLL+QLLSARLGVATGRHLAELCREEYP+WARMVLW+MAE+ALIG+DIQEVIGSAIAIKILSNG++PLW+GVVITALDCFIFLFLENYG+RKL AVFA+ Sbjct: 3 ETDRERPLLAS--EERAYEETEKVLIVGIDEEEDADYDDDPGNSPKFSWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITALDCFIFLFLENYGIRKLEAVFAI 195
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.981e-78 Identity = 144/202 (71.29%), Postives = 165/202 (81.68%), Query Frame = 1 Query: 112 EQEQDHLLPL--------LADDREERAYDPTEKVVVIXXXXXXXXNLS-TAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVFAV 690 E+E+D LLP D E A++ EK++++ T PPFSW+KLWLFTGPGFLMSIAFLDPGNLEGDLQ+GAIAGYSLLWLL+WATA+GLL+Q+LSAR+GVATGRHLAELCR+EYP+WAR VLW MAELALIG+DIQEVIGSAIAI+ILS G LPLW+GVVITA DCF+FLFLENYGVRKL AVFAV Sbjct: 10 EEEEDRLLPPPPPSQSLPSTDSESEAAFETNEKILIVDFESPDDPTTGDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELALIGADIQEVIGSAIAIQILSRGFLPLWAGVVITASDCFLFLFLENYGVRKLEAVFAV 211
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.750e-67 Identity = 118/187 (63.10%), Postives = 148/187 (79.14%), Query Frame = 1 Query: 130 LLPLLADDREERAYDPTEKVVVIXXXXXXXXNLSTAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVFAV 690 L+P + E+ ++ + ++ + PPFSW KLW FTGPGFLMSIAFLDPGN+EGDLQ+GA+AGYSLLWLLLWAT +GLL+QLLSAR+GVATGRHLAE+CR EYPSWAR++LW MAE+ALIG+DIQEVIGSAIA++IL+ G LP+W GV+IT+ DCF+ +LE G+RKL +FAV Sbjct: 27 LVPETSQPEEDELHESPPENQILNVEEDRDKTYDSVPPFSWAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARIGVATGRHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVGVIITSFDCFLISYLEKCGMRKLEGLFAV 213
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.098e-55 Identity = 98/146 (67.12%), Postives = 124/146 (84.93%), Query Frame = 1 Query: 247 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVF 684 ++K LW FTGPGFLMSIA+LDPGNLE D+Q+GA+AGY LLW+L W+T +G +Q+L++RLGV TG+HLAE CRE+YP R++LW+M ELA+IGSDIQEVIG+AIA++ILSNG +PLW+GV+ TA D F FLFLE YG+RKL A F Sbjct: 70 NFKTLWAFTGPGFLMSIAYLDPGNLESDIQAGAMAGYQLLWVLFWSTVIGFWLQMLASRLGVVTGKHLAEHCREQYPKTPRLLLWLMTELAIIGSDIQEVIGTAIALQILSNGHIPLWAGVLFTAADTFTFLFLEKYGIRKLEAFF 215
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 5.448e-55 Identity = 101/147 (68.71%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 244 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVF 684 FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+LL AT VGLL+Q L+ARLGV TG HLAE+C +YP R++LW+M ELA+IGSD+QEVIGSAIAI +LS G +PLW GV+IT D F+FLFL+ YG+RKL A F Sbjct: 65 FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFF 211
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 7.115e-55 Identity = 101/147 (68.71%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 244 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVF 684 FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+LL AT VGLL+Q L+ARLGV TG HLAE+C +YP R++LW+M ELA+IGSD+QEVIGSAIAI +LS G +PLW GV+IT D F+FLFL+ YG+RKL A F Sbjct: 65 FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLWGGVLITIADTFVFLFLDKYGLRKLEAFF 211
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54 Identity = 100/147 (68.03%), Postives = 123/147 (83.67%), Query Frame = 1 Query: 244 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVF 684 FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+LL AT VGLL+Q L+ARLGV TG HLAE+C +YP R++LW+M ELA+IGSD+QEVIGSAIAI +LS G +PL+ GV+IT D F+FLFL+ YG+RKL A F Sbjct: 65 FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLYGGVLITIADTFVFLFLDKYGLRKLEAFF 211
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.752e-53 Identity = 102/175 (58.29%), Postives = 133/175 (76.00%), Query Frame = 1 Query: 160 ERAYDPTEKVVVIXXXXXXXXNLSTAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVF 684 ++AY EKV++ + ST FS++KLW FTGPGFLMSIA+LDPGN+E D+QSGA A Y +LW+LLWAT +GLL+Q L+ARLGV TG HLAE+C +Y R +LW+M E+A+IGSD+QEVIG+AIAI +LSN ++PLW GV+IT +D F FLFL+ YG+RKL +F Sbjct: 51 KQAYFSDEKVLI-------PDDDSTNVGFSFRKLWAFTGPGFLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLF 218
BLAST of FC930477 vs. ExPASy Swiss-Prot
Match: NRAM1_HUMAN (Natural resistance-associated macrophage protein 1 OS=Homo sapiens GN=SLC11A1 PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.136e-52 Identity = 97/149 (65.10%), Postives = 119/149 (79.87%), Query Frame = 1 Query: 244 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREEYPSWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWSGVVITALDCFIFLFLENYGVRKLAAVFAV 690 FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+LLWAT +GLL Q L+ARLGV TG+ L E+C YP R VLW+ ELA++GSD+QEVIG+AIA +LS G +PLW GV+IT +D F FLFL+NYG+RKL A F + Sbjct: 53 FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKLEAFFGL 201 The following BLAST results are available for this feature:
BLAST of FC930477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930477 ID=FC930477; Name=FC930477; organism=Citrus clementina; type=EST; length=692bpback to top |