FC930489

Overview
NameFC930489
Unique NameFC930489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.417e-76
Identity = 86/103 (83.50%), Postives = 95/103 (92.23%), Query Frame = 1
Query:  196 MAQNDSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            MAQN S+ +FLD AV+AAK+AG+IIR GFY+TK+VEHKG VDLVTETDKACED IFNHLKQ+FP+HKFIGEETTAACG  ELTDEPTWIVDPLDGTTNFVHGF
Sbjct:    1 MAQNGSVEQFLDVAVEAAKKAGEIIREGFYKTKHVEHKGMVDLVTETDKACEDFIFNHLKQRFPSHKFIGEETTAACGNFELTDEPTWIVDPLDGTTNFVHGF 103          

HSP 2 Score: 122.479 bits (306), Expect = 2.417e-76
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIA 722
            LFTG+ G+GAF NGKPIKVSSQ+ELVK+LLATEAGT RDK  +DA+T RINSLLFKVRSLRM GSCALNLCG+A
Sbjct:  131 LFTGIDGKGAFLNGKPIKVSSQSELVKALLATEAGTNRDKLVVDATTGRINSLLFKVRSLRMCGSCALNLCGVA 204          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 8.339e-74
Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 1
Query:  196 MAQNDSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            MA NDSL +FL  A+DAAK+AG+IIR GFY+TK+VEHKGQVDLVTETDK CE+L+FNHLKQ FP HKFIGEETTAA G TELTDEPTWIVDPLDGTTNFVHGF
Sbjct:    1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGF 103          

HSP 2 Score: 116.316 bits (290), Expect = 8.339e-74
Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIA 722
            LFTGV G+GAF NGK IKVS+Q+EL+ +LL TEAGTKRDK TLD +TNRINSLL KVRSLRMSGSCAL+LCG+A
Sbjct:  131 LFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVA 204          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.690e-71
Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 1
Query:  196 MAQNDSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            MA N  L+ FL TAVDAAKRAG++IR GFY  KNVEHKGQVDLVTETDK+CED+IFN LKQQ+P HKFIGEETTAA GATELTDEPTWIVDPLDGTTNFVHGF
Sbjct:    1 MAANVPLSDFLATAVDAAKRAGEVIRKGFYVKKNVEHKGQVDLVTETDKSCEDIIFNCLKQQYPNHKFIGEETTAAYGATELTDEPTWIVDPLDGTTNFVHGF 103          

HSP 2 Score: 112.464 bits (280), Expect = 1.690e-71
Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIA 722
            LFTGV  QGAF NG PI VSS+ ELV  LL TE GTKRDK T+DA+TNRIN LLFKVRS+RM+GSCAL+LCGIA
Sbjct:  131 LFTGVRRQGAFLNGVPIHVSSKDELVNCLLVTEVGTKRDKSTVDATTNRINGLLFKVRSIRMAGSCALDLCGIA 204          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 5.333e-70
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 1
Query:  196 MAQNDSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            MA+N SL +FL  AVDAAKRAG+IIR GF++TK+V HKGQVDLVTETDKACEDLIFNHLKQ FP+HKFIGEET+AA G  +LTDEPTWIVDP+DGTTNFVHGF
Sbjct:    1 MARNGSLEEFLGVAVDAAKRAGEIIRKGFHETKHVVHKGQVDLVTETDKACEDLIFNHLKQHFPSHKFIGEETSAATGDFDLTDEPTWIVDPVDGTTNFVHGF 103          

HSP 2 Score: 110.538 bits (275), Expect = 5.333e-70
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIA 722
            LFTG++G+GA+ NGKPIKVSSQ+ELVKSLL TE GT RD  T++ +T RIN+LLFKVRSLRM GSCAL+LC +A
Sbjct:  131 LFTGINGKGAYLNGKPIKVSSQSELVKSLLGTEVGTTRDNLTVETTTRRINNLLFKVRSLRMCGSCALDLCWVA 204          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.284e-65
Identity = 76/98 (77.55%), Postives = 89/98 (90.82%), Query Frame = 1
Query:  214 LAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAAC-GATELTDEPTWIVDPLDGTTNFVHGF 504
            + +F+D A++AAK+AG+IIR+GFY++K++EHKG VDLVTETDKACE LIFNHLKQ FP+HKFIGEETTAA  G  ELTDEPTWIVDPLDGTTNFVHGF
Sbjct:    1 MEEFVDVAIEAAKKAGEIIRHGFYKSKHIEHKGVVDLVTETDKACEVLIFNHLKQCFPSHKFIGEETTAAASGNFELTDEPTWIVDPLDGTTNFVHGF 98          

HSP 2 Score: 110.538 bits (275), Expect = 1.284e-65
Identity = 51/74 (68.92%), Postives = 65/74 (87.84%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIA 722
            LFT ++G+GAF NGK I+VSS+++LVK+L+ATE GT RDK  +DA+T RIN ++FKVRSLRMSGSCALNLCG+A
Sbjct:  126 LFTAIYGRGAFLNGKSIRVSSESQLVKALVATEVGTNRDKAIVDATTGRINRVIFKVRSLRMSGSCALNLCGVA 199          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.283e-32
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 1
Query:  229 DTAVDAAKRAGKIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH F
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRF 115          

HSP 2 Score: 62.3882 bits (150), Expect = 2.283e-32
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIA 722
            L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A
Sbjct:  143 LYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLA 217          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.973e-32
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 1
Query:  229 DTAVDAAKRAGKIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH F
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRF 115          

HSP 2 Score: 62.3882 bits (150), Expect = 2.973e-32
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIA 722
            L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A
Sbjct:  143 LYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLA 217          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPA2_HUMAN (Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.203e-31
Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 1
Query:  235 AVDAAKRAGKIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE  A+     LT  PTWI+DP+DGT NFVH F
Sbjct:   23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRF 113          

HSP 2 Score: 60.8474 bits (146), Expect = 3.203e-31
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIA 722
            L+TG  G+GAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A
Sbjct:  141 LYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLA 215          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPA1_BOVIN (Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.200e-30
Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query:  208 DSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            D   + +D AV  A +AG+++R       N+  K    DLVT TD+  E ++   +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGF
Sbjct:    3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGF 102          

HSP 2 Score: 57.3806 bits (137), Expect = 1.200e-30
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIA 722
            ++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+    + I  LL   +  +R  G+ ALN+C +A
Sbjct:  130 MYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMCLVA 204          
BLAST of FC930489 vs. ExPASy Swiss-Prot
Match: IMPA1_PIG (Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.851e-30
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query:  208 DSLAKFLDTAVDAAKRAGKIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGF 504
            D   + +D AV  A++AG+I+R       N+  K    DLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGF
Sbjct:    3 DPWQECMDYAVTLARQAGEIVREALKNEMNIMIKSSPADLVTATDEKVEKMLISSIKEKYPSHSFIGEESVAAGEKSVLTDNPTWIIDPIDGTTNFVHGF 102          

HSP 2 Score: 52.373 bits (124), Expect = 5.851e-30
Identity = 27/75 (36.00%), Postives = 45/75 (60.00%), Query Frame = 3
Query:  501 LFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIA 722
            ++TG  G+GAF +G+ ++VS Q ++  SLL TE G+ R   T+    + +  LL   +  +R  G+ ALN+C +A
Sbjct:  130 MYTGRKGRGAFCDGQKLQVSPQKDVTNSLLVTELGSSRTPETVRIILSNMERLLCIPIHGIRGVGTAALNMCFVA 204          
The following BLAST results are available for this feature:
BLAST of FC930489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
IMP3_SOLLC2.417e-7683.50Inositol monophosphatase 3 OS=Solanum lycopersicum... [more]
VTC4_ARATH8.339e-7482.52Inositol-phosphate phosphatase OS=Arabidopsis thal... [more]
IMPP_MESCR1.690e-7183.50Inositol monophosphatase OS=Mesembryanthemum cryst... [more]
IMP1_SOLLC5.333e-7080.58Inositol monophosphatase 1 OS=Solanum lycopersicum... [more]
IMP2_SOLLC1.284e-6577.55Inositol monophosphatase 2 OS=Solanum lycopersicum... [more]
IMPA2_RAT2.283e-3252.69Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE2.973e-3252.69Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]
IMPA2_HUMAN3.203e-3152.75Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA... [more]
IMPA1_BOVIN1.200e-3046.00Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 ... [more]
IMPA1_PIG5.851e-3047.00Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34008B02EF PostHarvC1 Citrus clementina cDNA clone C34008B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930489 ID=FC930489; Name=FC930489; organism=Citrus clementina; type=EST; length=722bp
GGTGGTGTCGGATTAGATTGGTTTGATGGTTTCATTTTGCTACGTATACA
AAAAAAAAATCAAATAAAAAGAAAATAGCTCAAAAACGAAGCACAACCTG
TCATTACCACCATCATCACTCATCAGCTCGCTGTCCCTTCTCTTCTCGTT
CTTCTCTTTAATTTTTTAATCCTGTATAATAAAAAATATACCCATATGGC
ACAAAATGATTCGCTTGCAAAGTTCTTGGACACTGCAGTTGATGCAGCTA
AGAGGGCTGGCAAGATAATCCGTAATGGGTTCTATCAAACCAAAAATGTG
GAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCATGTGA
GGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAGTTCA
TTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGATGAA
CCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGCATGG
CTTTTTACTGGAGTCCATGGACAAGGTGCATTTTTTAATGGAAAACCTAT
AAAAGTATCATCTCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGG
CTGGAACAAAACGTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATC
AATAGCTTGCTATTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGC
ATTGAATCTTTGTGGAATTGCA
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