FC930491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930491 vs. ExPASy Swiss-Prot
Match: SERC3_PONAB (Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.534e-14 Identity = 53/187 (28.34%), Postives = 85/187 (45.45%), Query Frame = 1 Query: 208 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLCLYVLAFGFSGLLF 720 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R+S +FF + S+LM VK KDPR ++H+G W KI +++ F++P S + + G+ H WNE+WV E+ WY ALL + Y+L+ GLL+ Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLY 225
BLAST of FC930491 vs. ExPASy Swiss-Prot
Match: SERC3_BOVIN (Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13 Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 349 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLCLYVLAFGFSGLLF 720 AV R+S +FF S+LM+ VK KDPR ++H+G W KI +++ F++P + + I G+ H WNE+WV E+ WY ALL V+ Y+L+ F+GLL+ Sbjct: 96 AVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSFYIPGGHFNTAWFVIGMVGAAFFILIQLVLLVDFAHSWNESWVNRMEEGNPKCWYAALLSVTSLFYILSIIFAGLLY 224
BLAST of FC930491 vs. ExPASy Swiss-Prot
Match: SERC3_HUMAN (Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 52/187 (27.81%), Postives = 84/187 (44.92%), Query Frame = 1 Query: 208 RIAYCGLFALSLIVSWIL-REVAAPLMEKLPWINH----FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLCLYVLAFGFSGLLF 720 R+ Y + LS +VS+I+ R+ ++K+P H+ + D AV R+S +FF + S+LM VK KD R ++H+G W KI +++ F++P S + + G+ H WNE+WV E+ WY ALL + Y+L+ GLL+ Sbjct: 39 RLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLY 225
BLAST of FC930491 vs. ExPASy Swiss-Prot
Match: SERC3_MOUSE (Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 1 Query: 349 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP-NEIVSFYESISKFGSGXXXXXXXXXXXXXXHRWNETWVGYDEQ----FWYVALLVVSLCLYVLAFGFSGLLF 720 AV R++ +FF +LM+ VK KDPR ++H+G W KI ++I F++P + G+ H WNE WV E+ WY ALL + Y+L+ F+ LL+ Sbjct: 97 AVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVHNGFWFFKIAAIIGIMIGSFYIPGGSFTEVWFVAGMLGASFFIIIQLVLLVDMAHSWNELWVNRMEEGNPRLWYAALLSFTSLFYILSIVFAALLY 225 The following BLAST results are available for this feature:
BLAST of FC930491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930491 ID=FC930491; Name=FC930491; organism=Citrus clementina; type=EST; length=720bpback to top |