FC930497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_PEA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 440.269 bits (1131), Expect = 4.833e-123 Identity = 206/228 (90.35%), Postives = 222/228 (97.37%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLFT 685 GR+DGCS GKGGSMHFYKKDSGFYGGHGIVGAQ+PLGCGLAF QKY KDE+VTFALYGDGAANQGQLFEALNI+ALWDLPAILVCENNHYGMGTA WR+AKSP+Y+KRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIER+RKL+L+HD+ATEKELKD EKEVRKEVD+AIAKAK+SPMP+PS LF+ Sbjct: 146 GRRDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKDSPMPDPSDLFS 373
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA2_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2) HSP 1 Score: 436.417 bits (1121), Expect = 6.980e-122 Identity = 204/228 (89.47%), Postives = 220/228 (96.49%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLFT 685 GRK GCSHGKGGSMHFYKKD+ FYGGHGIVGAQIPLGCGLAFAQKY+KDE VTFALYGDGAANQGQLFEALNI+ALWDLPAILVCENNHYGMGTA WR+AKSP+Y+KRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ RDPIER+RKL+L HD+ATEKELKD+EKE+RKEVDDA+A+AKESP+P+ S LFT Sbjct: 142 GRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDDAVAQAKESPIPDASELFT 369
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA1_ARATH (Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At1g59900 PE=1 SV=2) HSP 1 Score: 435.647 bits (1119), Expect = 1.191e-121 Identity = 204/228 (89.47%), Postives = 220/228 (96.49%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLFT 685 GR+ GCS GKGGSMHFYKK+S FYGGHGIVGAQ+PLGCG+AFAQKY+K+E VTFALYGDGAANQGQLFEALNI+ALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDA AVKQACKFAK+HAL+ GP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERI+KL+L+HDLATEKELKD+EKE+RKEVDDAIAKAK+ PMPEPS LFT Sbjct: 138 GRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDAFAVKQACKFAKQHALEKGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPMPEPSELFT 365
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_SOLTU (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 425.246 bits (1092), Expect = 1.609e-118 Identity = 200/228 (87.72%), Postives = 216/228 (94.74%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLFT 685 GR+DGCS GKGGSMHFYKK+SGFYGGHGIVGAQ+PLG GLAFAQKY K++ VTFA+YGDGAANQGQLFEALN+AALWDLPAILVCENNHYGMGTAEWRAAKSP+YYKRGDYVPGL+VDGMD AVKQAC FAK+HALKNGP+ILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDP+ERIR LILAH++ATE ELKDIEKE RK VD+AIAKAKESPMP+PS LFT Sbjct: 140 GRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLRVDGMDVFAVKQACTFAKQHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKESPMPDPSELFT 367
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_DICDI (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.200e-75 Identity = 140/228 (61.40%), Postives = 172/228 (75.44%), Query Frame = 2 Query: 5 RKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHA-LKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLFT 685 ++ GCS GKGGSMH + K+ FYGG+GIVGAQ PLG G+AFAQKY+K V A+YGDGAANQGQLFEA N+A+LW LP I +CENN YGMGT++ R+ +Y RG YV GLKVDGMD AVK+A K+A E NGP+ILEMDTYRY GHSMSDPG TYRTR+E++ VRQ RDPIE IR++IL + +ATE +L IE+ VR E++ A KA +P+P+ LFT Sbjct: 132 KETGCSKGKGGSMHMFTKN--FYGGNGIVGAQCPLGAGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNKYGMGTSQKRSTAGHDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGHSMSDPGITYRTREEVNHVRQTRDPIENIRQIILDNKIATEDQLAAIEETVRDEMEKASEKAIAAPLPQARELFT 357
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_CAEEL (Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=3 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.022e-72 Identity = 137/228 (60.09%), Postives = 167/228 (73.25%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHA-LKNGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSXLF 682 GR G HGKGGSMH Y K+ FYGG+GIVGAQ PLG G+A A KY + + V LYGDGAANQGQLFEA N+A LWDLP + VCENN +GMGT R++ S YY RGDYVPG+ VDGMD LAV++A K+AKE+ GP+++EM TYRYHGHSMSDPG++YRTR+EI VR+ RDPI + I+ LATE+ELK I+KEVRKEVD+A+ A + P L+ Sbjct: 134 GRVAGNVHGKGGSMHMYTKN--FYGGNGIVGAQQPLGAGVALAMKYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALY 359
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_SCHPO (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=pda1 PE=1 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.277e-72 Identity = 132/224 (58.93%), Postives = 167/224 (74.55%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEP 670 GR+ G S GKGGSMH + K+ FYGG+GIVGAQIPLG G+ FAQKY + T TFALYGDGA+NQGQ FEA N+A LW LP I CENN YGMGT+ R++ +YKRG Y+PGL V+GMD LAV QA KFAK++ ++N P+++E TYRY GHSMSDPG+TYR+R+E+ VR RDPIE ++K I+ +A ELK+IEK +R VD+ + A+ESP P+P Sbjct: 157 GRQCGASKGKGGSMHIFAKN--FYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPFPDP 378
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_SMIMA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.973e-72 Identity = 129/222 (58.11%), Postives = 167/222 (75.23%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMP 664 GR+ GC+ GKGGSMH Y K+ FYGG+GIVGAQ+PLG G+A A KY++ + + LYGDGAANQGQ+FEA N+AALW LP I +CENN YGMGT+ RAA S YYKRGD++PG+ VDGMD L V++A KFA + GPM++E+ TYRYHGHSMSDPG +YRTR+EI VR + DPI ++ ++ ++LA+ +ELK+I+ EVRKE++DA A P P Sbjct: 113 GRRGGCAKGKGGSMHMYAKN--FYGGNGIVGAQVPLGVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEP 332
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_RAT (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2) HSP 1 Score: 270.781 bits (691), Expect = 5.072e-72 Identity = 130/222 (58.56%), Postives = 166/222 (74.77%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMP 664 GR+ GC+ GKGGSMH Y K+ FYGG+GIVGAQ+PLG G+A A KY+ + V LYGDGAANQGQ+FEA N+AALW LP I +CENN YGMGT+ RAA S YYKRGD++PGL+VDGMD L V++A KFA + GP+++E+ TYRYHGHSMSDPG +YRTR+EI VR + DPI ++ ++ +LA+ +ELK+I+ EVRKE++DA A P P Sbjct: 140 GRRGGCAKGKGGSMHMYAKN--FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359
BLAST of FC930497 vs. ExPASy Swiss-Prot
Match: ODPA_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 5.072e-72 Identity = 130/222 (58.56%), Postives = 166/222 (74.77%), Query Frame = 2 Query: 2 GRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMP 664 GR+ GC+ GKGGSMH Y K+ FYGG+GIVGAQ+PLG G+A A KY+ + V LYGDGAANQGQ+FEA N+AALW LP I +CENN YGMGT+ RAA S YYKRGD++PGL+VDGMD L V++A KFA + GP+++E+ TYRYHGHSMSDPG +YRTR+EI VR + DPI ++ ++ +LA+ +ELK+I+ EVRKE++DA A P P Sbjct: 140 GRRGGCAKGKGGSMHMYAKN--FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEP 359 The following BLAST results are available for this feature:
BLAST of FC930497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930497 ID=FC930497; Name=FC930497; organism=Citrus clementina; type=EST; length=703bpback to top |