FC930515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_THICR (3-dehydroquinate synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=aroB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.730e-35 Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 130 VDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 V+LG+RSYPI+IG GLL +L + +V G +VL+V+N TVAPLYL+K A + V+ VILPDGE YKN+D L ++FD AIE+R DR+CTFVALGGGVIGDM G+AAASY RGV Sbjct: 6 VELGERSYPIFIGQGLLGQAELFKPYVTGTQVLIVSNTTVAPLYLEKAKQAFS----GYDVKTVILPDGEQYKNLDVLNQIFDVAIENRFDRKCTFVALGGGVIGDMTGFAAASYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEE4 (3-dehydroquinate synthase OS=Pseudomonas entomophila (strain L48) GN=aroB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.261e-34 Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPIYIG GLLD P+LL H+ G++V +V+N TVAPLYL++++ L SV V+LPDGE YKN +TL VFD + +R DRR T VALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKTLGA----YSVLPVVLPDGEKYKNWETLQLVFDALLSARHDRRTTVVALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEF5 (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=aroB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34 Identity = 70/121 (57.85%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPI+IG GLLD P+LL H+ G++V +++N TVAPLYL++ LTR SV +V+LPDGE YKN +TL +FD + +R DRR T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIHIGEGLLDQPELLVPHIAGRQVAIISNETVAPLYLER----LTRSLGQFSVISVVLPDGEAYKNWETLQLIFDGLLTARHDRRTTIIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEPF (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=aroB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 9.492e-34 Identity = 68/121 (56.20%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPI+IG GLLD P+LL H+ G++V +++N TVAPLYL+++T +L + SV +V+LPDGE +KN +TL +FD + +R DRR T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIHIGEGLLDQPELLAPHIHGRQVAIISNETVAPLYLERLTRSLAQ----FSVVSVVLPDGEAFKNWETLQLIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEPW (3-dehydroquinate synthase OS=Pseudomonas putida (strain W619) GN=aroB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.114e-33 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPIYIG GLLD P+LL H+ G+++ +V+N TVAPLYL++++ AL SV VILPDGE +KN +TL +FD + +R DRR T VALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQIAIVSNETVAPLYLERLSKALGA----YSVLPVILPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEPK (3-dehydroquinate synthase OS=Pseudomonas putida (strain KT2440) GN=aroB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.114e-33 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPIYIG GLLD P+LL H+ G++V +V+N TVAPLYL++++ AL SV V+LPDGE +KN +TL +FD + +R DRR T VALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKALGA----YSVLPVVLPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEP1 (3-dehydroquinate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aroB PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.114e-33 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPIYIG GLLD P+LL H+ G++V +V+N TVAPLYL++++ AL SV V+LPDGE +KN +TL +FD + +R DRR T VALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIYIGEGLLDQPELLAPHIAGRQVAIVSNETVAPLYLERLSKALGA----YSVLPVVLPDGEAHKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEMY (3-dehydroquinate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroB PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.607e-33 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 + V+LG+RSYPIYIGSGLL P+LL +HV G++V VVTN TVAPLYL + +L N V V+LPDGE +KN +TL +FD + +R DRR T VALGGGVIGDM G+AAA Y RGV Sbjct: 4 LHVELGERSYPIYIGSGLLSRPELLSRHVAGRQVAVVTNETVAPLYLQTLLKSLEGFN----VATVVLPDGEAFKNWETLQLIFDGLLTARHDRRTTVVALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEFS (3-dehydroquinate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=aroB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.049e-32 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++VDLG+RSYPI+IG GLLD P+LL H+ G++V +++N TVAPLYL+++ +L SV +VILPDGE +KN +TL +FD + +R DRR T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVDLGERSYPIHIGEGLLDQPELLAPHIAGRQVAIISNETVAPLYLERLNRSLAA----YSVISVILPDGEAHKNWETLQLIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC930515 vs. ExPASy Swiss-Prot
Match: AROB_PSEU2 (3-dehydroquinate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=aroB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.790e-32 Identity = 67/121 (55.37%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 124 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 486 ++V+LG+RSYPI+IG GLLD P+LL H+ G++V +V+N TVAPLYL+++T L N V ++LPDGE +KN +TL +FD + +R DRR T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LKVELGERSYPIHIGEGLLDQPELLTPHIVGRQVAIVSNTTVAPLYLERLTQTLAGYN----VLPIVLPDGEAFKNWETLQTIFDGLLTARHDRRTTVIALGGGVIGDMAGFAAACYQRGV 120 The following BLAST results are available for this feature:
BLAST of FC930515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930515 ID=FC930515; Name=FC930515; organism=Citrus clementina; type=EST; length=487bpback to top |