FC930539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 337.035 bits (863), Expect = 6.023e-92 Identity = 168/203 (82.76%), Postives = 186/203 (91.63%), Query Frame = 2 Query: 116 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ALNSA+DEEMSADPKVF+MGEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVL+PYS+EDARGLLKAAIRDPDPVVF Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVF 202
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.895e-86 Identity = 166/203 (81.77%), Postives = 175/203 (86.21%), Query Frame = 2 Query: 116 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 M G+IR K IRP S R +SSA KQM VR+ALNSALD EMSAD KVFLMGEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQISVPIVFRG NG AAGVGAQHS CYA+WY S PGLKVL P+S+EDARGLLKAAIRDPDPVVF Sbjct: 1 MLGVIRNKT----------IRPSFSAFRFFSSA-KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVF 192
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.222e-68 Identity = 123/172 (71.51%), Postives = 149/172 (86.63%), Query Frame = 2 Query: 206 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVV 721 S+ VK+M VR+ALNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+RV+DTPITE GFTG+ GAA+ GL+P+ EFMTFNFSMQAIDHI+NSAA++ YMS G + PIVFRGPNG AA V AQHSQ +A WY S+PGLKV+SPYS+EDARGLLKAAIRDP+PVV Sbjct: 32 SNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVV 203
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.556e-68 Identity = 125/189 (66.14%), Postives = 152/189 (80.42%), Query Frame = 2 Query: 158 SPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 +P + +RP + S+ K M VREALNSA+ EE+ D VFL+GEEV +Y GAYK+SKGLL+++G RV+DTPITE GFTG+ VGAA GLKP+VEFM+FNFSMQAIDH++NSAAK++YMS G +VFRGPNGAA GVGAQHSQ ++ WY S+PGLKVL PYS+EDARGLLKAAIRDP+PVVF Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVF 205
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.706e-67 Identity = 117/171 (68.42%), Postives = 148/171 (86.55%), Query Frame = 2 Query: 212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 A K++ VR+A+NSALDEE++ D KVF+MGEEV +Y GAYKI+KGL +KYG +R++DTPITEAGF GIGVGAA G +P++EFMTFNF+MQAIDHIINS+AK++YMS G++ PIV+RGPNG VGAQHSQC+AAWY SVPGLKV++P+S+ D RGLLK+AIRD +PVV+ Sbjct: 25 ATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVY 195
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.144e-66 Identity = 123/171 (71.93%), Postives = 145/171 (84.80%), Query Frame = 2 Query: 212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 A M VR+ALN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTPITE GF GI VGAA+ GL+P+ EFMTFNFSMQAID IINSAAK+ YMS+G++ VPIVFRGPNGAAAGV AQHSQ ++AWYA PGLKV+ PYS+EDA+GLLKAAIRD +PVVF Sbjct: 21 AASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVF 191
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 249.21 bits (635), Expect = 1.652e-65 Identity = 118/167 (70.66%), Postives = 143/167 (85.63%), Query Frame = 2 Query: 224 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 M VREAL A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF G+GVGAA GL+P+VEFMTFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA V AQHSQCYAAWY+ +PGLKV+ PY++ DA+GLLKAAIRDP+PV+F Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIF 304
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 8.198e-65 Identity = 117/170 (68.82%), Postives = 142/170 (83.53%), Query Frame = 2 Query: 212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVV 721 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G SVPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP+SSEDA+GL+K+AIRD +PVV Sbjct: 29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVV 198
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 3.115e-64 Identity = 115/170 (67.65%), Postives = 142/170 (83.53%), Query Frame = 2 Query: 212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVV 721 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVV 198
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 4.068e-64 Identity = 115/170 (67.65%), Postives = 142/170 (83.53%), Query Frame = 2 Query: 212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVV 721 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVV 198 The following BLAST results are available for this feature:
BLAST of FC930539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930539 ID=FC930539; Name=FC930539; organism=Citrus clementina; type=EST; length=725bpback to top |