FC930719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 80/194 (41.24%), Postives = 123/194 (63.40%), Query Frame = 2 Query: 41 RHTLV--ALLIILLEFSTNLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDE---LGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINSYAA 607 + TLV ALL+IL S A+ ++I+TSC+ T Y +C +SLS YA I++NP+ LA+TAL ++L T+ M ++++ G+ R+ A A+ DC+E + DS+D + S DE L H + ++F M +V+TWVSAALT E TC+DG G+ ++G K +R ++ VA +TSNALAL+N++AA Sbjct: 5 KSTLVFSALLVILAAASAAPAN--------QFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYA-AIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 53/210 (25.24%), Postives = 108/210 (51.43%), Query Frame = 2 Query: 50 LVALLIILLEFSTNLASNPS----DNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKM-SRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHI-RNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINSYAAGSNPPSP*RDRNQAILNH 661 L+A ++ + +TN N +++ +++ CS T+Y LC+ +++ K ++ K + +LN+T KA K + K+ ++ G+ PRE A+ DC+E I +++DEL ++++L + + D++T +S+A+T + TC+DG + + + + + V H+ SNALA+I + RD++ N+ Sbjct: 31 LLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVT-ALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSSTFTNN 239
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 55/205 (26.83%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 2 LERERKRMEGSFLRHTLVALLIILLEFSTNLASNPSDNSNIEY---IRTSCSGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 598 + +++K++ + LV +I + N N DN N + +++SCS T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T + TC+DG N + + + + V + SNALA+I + Sbjct: 23 IPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 55/205 (26.83%), Postives = 105/205 (51.22%), Query Frame = 2 Query: 2 LERERKRMEGSFLRHTLVALLIILLEFSTNLASNPSDNSNIEY---IRTSCSGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 598 + +++K++ + LV +I + N N DN N + +++SCS T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T + TC+DG N + + + + V + SNALA+I + Sbjct: 23 IPKKKKKLFLALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 47/161 (29.19%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 131 IRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKS---TSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT--MGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 598 +R+SCS T Y LC ++ ++ K + ++N+T+ A + T + ++K + G+ PRE A+ DC+E I +++DEL +++++L H+ + L GD++T +S+A+T ++TC+DG + + + + + V H+ SNALA+I + Sbjct: 59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRK--GLTPREKT-ALHDCLETIDETLDELHETVEDL-HLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKN 215
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 55/190 (28.95%), Postives = 91/190 (47.89%), Query Frame = 2 Query: 53 VALLIILLEFSTNLASNPSDNSNIEYIRTS-------CSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKST---SRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALI 592 V L+ +++ + ++ N SDN+ E I TS C+ T Y+ C +L AK S+P L TA N T+K S+ M+++ + P A+ C E++ +I EL S +ELG + ++ W+SA +++E TC+DG QG G I++ + LT N LA++ Sbjct: 24 VLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRK-DAKDTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDP-----RAKMALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQG--TQGNAGETIKKALKTAVQLTHNGLAMV 205
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 52/194 (26.80%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 50 LVALLIILLEFSTNLASNPSDNSNI--------EYIRTSCSGTIYRRLCYRSL---SVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRI-PGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT-MGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALI 592 LVA +I ++ + + N D+++I ++++CS T++ LCY ++ S ++ K+ S K + +LNIT+KA + + ++ + G+ PRE A+ DC+E + +++DEL ++++L N + D++T +S+A+T ++TC+DG + + ++ + V + SNALA+I Sbjct: 31 LVAAVIGVVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQ-KDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKV-ALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 43/161 (26.71%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 113 NSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALIN 595 N++++ ++ C+ T YR+ C +L + K ++P L TA N+T+K ++ + + T A+ C E++ ++DEL +S +ELG + +++ W+SAA+++E+TC++G QG G +++ + LT N LA+I+ Sbjct: 52 NASVKAVKDVCAPTDYRKTCEDTL-IKNGKNTTDPMELVKTAFNVTMKQITDAAKKSQTIMELQK--DSRTRMALDQCKELMDYALDELSNSFEELGKFEFHLLDEALINLRIWLSAAISHEETCLEGFQG--TQGNAGETMKKALKTAIELTHNGLAIIS 207
BLAST of FC930719 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12 Identity = 45/156 (28.85%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 131 IRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 598 I+T C+ T+Y+ C +L K P+T + L + A + K ++ A+A C ++ ++ +EL SM + +NF + D+ +W+SA ++Y++TCVDG + G KT IR++ LTSN+LA+I S Sbjct: 95 IQTLCNSTLYKPTCQNTLKNETKK--DTPQTDPRSLLKSAIVAVNDDLDQVFKRVLSLKTENKDDKDAIAQCKLLVDEAKEELGTSMKRINDSEVNNFAKIVPDLDSWLSAVMSYQETCVDGFE----EGKLKTEIRKNFNSSQVLTSNSLAMIKS 244 The following BLAST results are available for this feature:
BLAST of FC930719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930719 ID=FC930719; Name=FC930719; organism=Citrus clementina; type=EST; length=727bpback to top |