FC930736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: BRWD1_HUMAN (Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens GN=BRWD1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.449e-13 Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ YI Y + PW K ++R E K+ + Y G CC + L FIDP T + + +F + ++ DFLV R +D A QRNW D+ + S D +WW G VLS +P ++PDS ++ Y V++ + TE SPW++ Sbjct: 970 QGHEAYIEAVRRNNIYELNPNKEPWR--KMDLRDQELVKIVGIRYEV--GPPTLCC-LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFR------SIIDDAWWFGTVLSQEPYQPQYPDSHFQCYIVRW--DNTEIEKLSPWDM 1121
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: BRWD3_HUMAN (Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens GN=BRWD3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.813e-12 Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ Y+ YS + + PW K ++R EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV ++ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + + E SPW++ Sbjct: 951 QGHEAYVRAVRKSKIYSVNLQKQPWN--KMDLREQEFVKIVGIKYEV--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--DNNEREKMSPWDM 1102
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: BRWD3_MOUSE (Bromodomain and WD repeat-containing protein 3 OS=Mus musculus GN=Brwd3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.980e-12 Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDPTSS-VSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ Y+ YS + + PW K ++R EF K+ ++Y G CC + L F+DP S ++ +F + ++ DFLV ++ A +RNW D+ + S D +WW G V S +P E+PDS ++ Y+V + + E SPW++ Sbjct: 949 QGHEAYVRAVRKSKIYSVNLQKQPWN--KMDLREQEFVKIVGIKYEI--GPPTLCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGDRFR------SIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHW--DNNEREKMSPWDM 1100
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: BRWD1_MOUSE (Bromodomain and WD repeat-containing protein 1 OS=Mus musculus GN=Brwd1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.504e-12 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ YI Y + PW K ++R E K+ L Y G C + L FIDP T +++ +F + ++ D LV R +D A QRNW D+ + S D +WW G VLS P ++PDS ++ Y V++ + TET SPW++ Sbjct: 971 QGHEAYIEAVRRNNIYELNPHKEPW--GKMDLRDQELVKIVGLRYEV--GPPTLLC-LKLAFIDPATGRLTDKSFSIRYHDMPDVIDLLVLRPFYDEARQRNWQPCDRFR------SIIDDAWWFGTVLSQDPYQPQYPDSHFQCYIVRW--DNTETEKLSPWDM 1122
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: PHIP_HUMAN (PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ Y+ YS + + PW K +R E K+ ++Y G CC + L F+DP T ++ +F + ++ DFLV R +FD A R W D+ + S D +WW G + S +P E+PDS ++ Y V + TE SPW++ Sbjct: 969 QGHEAYVEMARKNKIYSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFR------SVIDDAWWFGTIESQEPLQLEYPDSLFQCYNVCWDNGDTEK--MSPWDM 1120
BLAST of FC930736 vs. ExPASy Swiss-Prot
Match: PHIP_MOUSE (PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 88 QGHQEYIN-------YSGSREVGPWITVKGNIRAVEFCKVESLEYATASGSGDSCCKMTLKFIDP-TSSVSNMTFRLTLPEVTGFPDFLVERTRFDAAIQRNWTCRDKCKVWWKNESDEDGSWWDGRVLSVKPKSSEFPDSPWERYTVQYKTEPTETHLHSPWEL 558 QGH+ Y+ YS + + PW K +R E K+ ++Y G CC + L F+DP T ++ +F + ++ DFLV R +FD A R W D+ + S D +WW G + S +P E+PDS ++ Y V + TE SPW++ Sbjct: 969 QGHEAYVEMARKNKIYSINPKKQPWH--KMELREQELMKIVGIKYEV--GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGDRFR------SVIDDAWWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEK--MSPWDM 1120 The following BLAST results are available for this feature:
BLAST of FC930736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930736 ID=FC930736; Name=FC930736; organism=Citrus clementina; type=EST; length=744bpback to top |