FC930760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.534e-62 Identity = 126/187 (67.38%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 48 MEVATASAPIFG-LRTRMLATPP------RTSPR---TVNCNRNLSTSFISPFANGSVSSDFSGLRLRPDCLNPDSFCKSKPRSPVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 MEVA A+A F LR R A P R+ PR + + +LS F+SP+ GS+SSD G +LR + LNP +F SKP+ V+TMVIPF+ G+A EQPPPDLASYL+KNRIVYLGMS VPSVTELILAEFLYLQYED EKPIYLYINSTGTTK EKLGY+TEAFAIYDVMGYVKPPIFTLCV Sbjct: 1 MEVAAATATSFTTLRARTSAIIPSSTRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCV 187
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.684e-23 Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 3 Query: 291 PFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTTKGV-EKLGYETEAFAIYDVMGYVKPPIFTLCV 578 P+ ++ PPPDL S L K RI+YLGM S VTELI+A+ LYL++++ EKPIY YINSTGT+ + +GYETEAFAI D M Y+KPP+ T+C+ Sbjct: 11 PYYGDVSYRTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICI 117
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 309 AWEQPPPDLASYLYKNRIVYLGMSFVPS----------VTELILAEFLYLQYEDAEKPIYLYINSTGTTKGV-EKLGYETEAFAIYDVMGYVKPPIFTLCV 578 A++ PPPDL S L K RIVYLGM S VT+LI+A+ LYLQ++D +KPIY YINSTGT+ + +G+ETEAFAI D + Y+KPP+ T+C+ Sbjct: 15 AFKTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICI 115
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21 Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 3 Query: 321 PPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTK-GVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 PPPDL S L RIVY+GM VP+VTEL++AE +YLQ+ D ++PIY+YINSTGTT+ E +G E+E FAIYD + +K + T+CV Sbjct: 118 PPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCV 204
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.990e-18 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 3 Query: 324 PPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGT-TKGVEKLGYETEAFAIYDVMGYVKPPIFTL 572 PPDL S L RI YLGM VP+VTEL++A+F++L Y++ KPIYLYINS GT + +E +G ETEA+AI D + Y K ++T+ Sbjct: 169 PPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTI 252
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 294 FTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 ++ + PPPDL S L RIVYLG V EL++A+ LYL+ ED KPI +YINS G G+ET AFA+YD M +V+ PI T+C+ Sbjct: 16 YSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVA------GFETSAFAVYDTMRHVRMPIKTICL 104
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THEPX (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter sp. (strain X514) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCV Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCV 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THEP3 (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.632e-12 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T FAIYD M Y+KP + TLCV Sbjct: 19 DIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDIWLYINSPG--------GSITAGFAIYDTMQYIKPDVVTLCV 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_PELCD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=clpP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI++LG + V LI+A+ L+L+ ED EK I+LYINS G G T AIYD M YV+ P+ TLCV Sbjct: 19 DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFLYINSPG--------GVVTAGMAIYDTMQYVRCPVSTLCV 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_GEOUR (ATP-dependent Clp protease proteolytic subunit OS=Geobacter uraniireducens (strain Rf4) GN=clpP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG + +++ L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICV 92 The following BLAST results are available for this feature:
BLAST of FC930760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930760 ID=FC930760; Name=FC930760; organism=Citrus clementina; type=EST; length=629bpback to top |