FC930784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: GRSF1_MOUSE (G-rich sequence factor 1 OS=Mus musculus GN=Grsf1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.172e-15 Identity = 55/171 (32.16%), Postives = 78/171 (45.61%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV--HKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSP-----------------------------HRSIPRAKSHDEGKDSAVHTGIL------RLRGLPFSAGKDDIMDFF 672 VVRLRGLP+ C E D+ +FF GL+IVD+ FV ++ + TGEA+ P + AL ++R+ +G RY+E+F S+R E + + SP + I K E AV G L +RGLPF A DI++FF Sbjct: 250 VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHKGKKMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSEKLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFF 420
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: GRSF1_HUMAN (G-rich sequence factor 1 OS=Homo sapiens GN=GRSF1 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 54/173 (31.21%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVDVLFV--HKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEY------YKA-----------------------IANEVSDVRGGSPHRSIPRAK--------SHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFF 672 VVRLRGLP+ C E D+ +FF GL+IVD+ FV ++ + TGEA+ P + AL ++R+ +G RY+E+F S+R E YK + ++ + + I K + D G S++H + +RGLPF A DI++FF Sbjct: 251 VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTAFESEKEIELPKEVPEKLPEAADFGTTSSLH--FVHMRGLPFQANAQDIINFF 421
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: ESRP2_RAT (Epithelial splicing regulatory protein 2 OS=Rattus norvegicus GN=Esrp2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14 Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKILC 684 VVR RGLP+ ++ DVA FF GL+I L ++ + GEA Q D ALQR++ +MG RY+EV+++ +E+ K G + R S ++ ILRLRGLPFSAG D++DF C Sbjct: 247 VVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFEDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKI---------AGGTSLEVARFLSRED-------QVILRLRGLPFSAGPADVLDFLGPEC 371
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: ESRP2_MOUSE (Epithelial splicing regulatory protein 2 OS=Mus musculus GN=Esrp2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 51/141 (36.17%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKILC 684 VVR RGLP+ ++ DVA FF GL+I L ++ + GEA Q D ALQR++ +MG RY+EV+++ +E+ K G + R S ++ ILRLRGLPFSAG D++ F C Sbjct: 248 VVRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKI---------AGGTSLEVARFLSRED-------QVILRLRGLPFSAGPTDVLGFLGPEC 372
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: ESRP2_HUMAN (Epithelial splicing regulatory protein 2 OS=Homo sapiens GN=ESRP2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKILC 684 VVR RGLP+ ++ DVA FF GL++ L ++ + GEA Q D ALQR++ +MG RY+EV+++ +E+ K G + R S ++ ILRLRGLPFSAG D++ F C Sbjct: 258 VVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYIEVYKATGEEFVKI---------AGGTSLEVARFLSRED-------QVILRLRGLPFSAGPTDVLGFLGPEC 382
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFF 672 VV+LRGLP+ C+ DV F I D V F++ + + +GEAF LG V AL+++R++MG RY+EVF+S R E + + S DSA + G +RLRGLPF K++I+ FF Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGFVRLRGLPFGCTKEEIVQFF 131
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFF 672 VV+LRGLP+ C+ DV F I D V F++ + + +GEAF LG V AL+++R++MG RY+EVF+S R E + + S DSA + G +RLRGLPF K++I+ FF Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGFVRLRGLPFGCTKEEIVQFF 131
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFF 672 VV+LRGLP+ C+ DV F I D V F++ + + +GEAF L V AL+++R++MG RY+EVF+S R E + + S DSA + G +RLRGLPF K++I+ FF Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGFVRLRGLPFGCTKEEIVQFF 131
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD----VLFVH-KNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFF 672 VV+LRGLP+ C+ DV F I D V F++ + + +GEAF L V AL+++R++MG RY+EVF+S R E + + S DSA + G +RLRGLPF K++I+ FF Sbjct: 12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTEMDWVLKH------------------SGPNSADSA-NDGFVRLRGLPFGCTKEEIVQFF 131
BLAST of FC930784 vs. ExPASy Swiss-Prot
Match: ESRP2_CHICK (Epithelial splicing regulatory protein 2 OS=Gallus gallus GN=ESRP2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 271 VVRLRGLPFDCTEVDVAEFFHGLDIVD---VLFVHKNNKFTGEAFCVLGYPLQVDFALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVSDVRGGSPHRSIPRAKSHDEGKDSAVHTGILRLRGLPFSAGKDDIMDFFKILC 684 V+R RGLP+ ++ D+A FF GL+I L ++ + GEA Q D AL+R++ +MG RY+EV+++ +E+ K + GG+ + + K++ V I+R+RGLPF+A ++D++ F C Sbjct: 227 VIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNAQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLK--------IAGGTSNE-----VAQFLSKENQV---IIRMRGLPFTATQEDVLGFLGPEC 351 The following BLAST results are available for this feature:
BLAST of FC930784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930784 ID=FC930784; Name=FC930784; organism=Citrus clementina; type=EST; length=714bpback to top |