FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 9.142e-88 Identity = 158/236 (66.95%), Postives = 192/236 (81.36%), Query Frame = 3 Query: 3 PSADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 PS DLV+EISRVLSDHR+P DLE +L ++PR+S+NLVEQVLKRCKNLGF AHRFFLWA+RIP F HS SYHILV+ILGS+KQFALLWDFLIE RE FEI+ ++FWIV RAY+RANLP++A RAFNRMVEFGIKP + DLDQLLH+LC +KHV A +FF AK P+ KTYSILVRG + + S ARK+FDEMLER C VD+LA+N+LL+A+CK+G++D + M +E Sbjct: 33 PSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 4.021e-43 Identity = 90/236 (38.14%), Postives = 146/236 (61.86%), Query Frame = 3 Query: 9 ADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVP 716 AD+ IS+VL P L+ +L+ R+S +VE VL R +N G +RFF W+++ +EHS +YH++++ +Q+ L+WD + +R+ + +N E F IV+R YARA ++AI AFN M ++ + P++ + LL ALCK K+V+ A + F+N + FTP KTYSIL+ G G L +AR++F EM++ C DI+ ++ +++ +CKAG +DEA G++R P Sbjct: 69 ADVAKNISKVLMS--SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM--LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.292e-32 Identity = 74/230 (32.17%), Postives = 126/230 (54.78%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 V +I R+L +H LEL+LN + L+ +VL RC + G +RFFLWA + PG+ HS +V IL +QF +W + E+R+ I PE+F +++R +A AN+ A+ + M ++G++P Y LL ALCK VK A + F++ + +F P ++ ++ L+ G G+L EA+++ +M E DI+ +LL AG + +A+ ++ + Sbjct: 67 VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 73/230 (31.74%), Postives = 123/230 (53.48%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 V + R+L LEL+LN + L+E+VL RC + G +RFF+WA + P + HS Y +V IL +QF +W + E+R+ I PE+F ++++ +A A++ AI + M +FG +P Y LL ALCK VK A + F++ + F ++ ++ L+ G VG++ EA+ + +M E DI+ + +LL AG + +A+ +LR+ Sbjct: 83 VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD 312 HSP 2 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 48/177 (27.12%), Postives = 79/177 (44.63%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDIL---GSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECV 713 GFE + L+D L GS K A L++ + F +N F +L + R +A +M E G +P I D LL + A+ D + F P Y++L++ L V + EA K+F EM +C D++ + +L+ CK G ID+ + +L + + Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-----RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29 Identity = 74/222 (33.33%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 27 ISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 I ++L+ D +E LN + ++S L+E+VLK+ N G A F WA+ GF+H+ +Y+ L++ LG KQF L+W + +++ + ++ E F ++ R YARA +AI AF++M EFG K D +++L L K ++V A + FD K + F P +K+Y+IL+ G G L ++ EM + D++A+ ++ A CKA +EA Sbjct: 69 ICKILTKFTDSK--VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL--LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28 Identity = 71/222 (31.98%), Postives = 123/222 (55.41%), Query Frame = 3 Query: 63 HDLELSLNTF-TPRISTNLVEQVLKRCKNL--GFSAHR---FFLWAKRIPGFEH-SAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 H L L + T ++S ++V V+++C ++ G H+ FF WA ++H S Y+ ++D+ G +QF L W LI++ ++++ EI+ E F I++R Y RA L ++A+ FNRM ++G P ++ L +++ A FFD+ K F P V Y+ LVRG GE+SEA K+F EM ++ ++ +++A+C+ G I AH + + Sbjct: 95 HALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWH-LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25 Identity = 65/232 (28.02%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFE-INPEIFWIVLRAYARANLPNDAIRAFNRMVE-FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 + ++ L+ H D+ L+ ++ +LV QVL+R N A+ FF+WA G+ HS +Y+ +VD+LG + F L+W+ + E+ +N+ + + + V+R A++ N A+ AF M + +G+K ++ L+ AL K ++ AH+ F P +T++IL+ G + +AR + D M + D++ + S +EA CK G+ + ML E Sbjct: 102 IDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23 Identity = 65/224 (29.02%), Postives = 117/224 (52.23%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 V + +V+ + ++E L+ +S +L+ +VL+R ++ A RFF WA GF H + +Y+ ++ IL T+QF + L E+ + E F I ++A+A A A+ F M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L EA +++++M+++ DI+AHN +LE + ++ +A Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM--ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22 Identity = 64/218 (29.36%), Postives = 115/218 (52.75%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA 671 V + +V+ + ++E L+ +S +L+ +VL+R ++ A RFF WA GF H++ +Y+ ++ IL T+QF + L E+ + E F I ++A+A A A+ F M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L EA +++++M++ DI+AHN +LE + ++ Sbjct: 131 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM--ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22 Identity = 64/218 (29.36%), Postives = 114/218 (52.29%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKA 671 V + +V+ + ++E L+ +S +L+ +VL+R ++ A RFF WA GF H + +Y+ ++ IL T+QF + L E+ + E F I ++A+A A A+ F M ++ K + ++ LL +L + K K A FD K FTP + TY++L+ G V L EA +++++M++ DI+AHN +LE + ++ Sbjct: 130 VERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTM--ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 345 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |