FC930801

Overview
NameFC930801
Unique NameFC930801
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10354 contig Ccv1_Contig10354:13..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.086e-83
Identity = 150/195 (76.92%), Postives = 164/195 (84.10%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+VLHAG TNKNAFK LI AEYTGV VEL  +FEMGVTNKTPE+LK+NPIGKVP+LETPDGPIFESNAIARYVARLKA NPL+GSSLID AHIEQWIDF SLEID NI+ WF PR G+AVYLP AEE             NTHLASNTYLVGH VTLADII+TCNL  GF++++ KSFTSEFPHVERYFWT+VN
Sbjct:    1 MALVLHAGKTNKNAFKTLIVAEYTGVKVELAPDFEMGVTNKTPEYLKLNPIGKVPLLETPDGPIFESNAIARYVARLKADNPLIGSSLIDYAHIEQWIDFGSLEIDANIISWFRPRFGYAVYLPPAEEAAISALKRALGALNTHLASNTYLVGHFVTLADIIVTCNLFFGFTKLMIKSFTSEFPHVERYFWTLVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.266e-80
Identity = 145/195 (74.36%), Postives = 163/195 (83.59%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+VLHAG+ NKNAFKALI AEY+GV VELVKNF+MGV+NKTPEFLKMNPIGK+PVLETPDGP+FESNAIARYV R KA NPL GSSLI+ AHIEQW DFS+ E+D NI +W  PR+G A Y+  +EE             NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+TKSFTSEFPHVERYFWTMVN
Sbjct:    1 MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGPVFESNAIARYVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.185e-78
Identity = 140/195 (71.79%), Postives = 161/195 (82.56%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+VLH  + NKNAFKALI AEY+GV VEL KNF+MGV+NKTPE+LKMNPIGKVP+LETPDGP+FESNAIARYV R K+ NPL GSSLI+ AHIEQWIDFS+ E+D N  +W  PR+GFA Y+  +EE             NTHLASNTYLVGHSVTLADI+MTCNL +GF+RI+TK+FTSEFPHVERYFWTMVN
Sbjct:    1 MALVLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGPVFESNAIARYVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.547e-78
Identity = 143/195 (73.33%), Postives = 158/195 (81.03%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+VLH G+ NKNAFKALI AEYTGV VEL KNFEMGV+NKTPEFLKMNP+GK+PVLETP+G +FESNAIARYVARLK  + L GSSLID +HIEQW+DFS+ E+D NI RW  PR+GF  Y+P  EE             NTHLASNTYLVGHSVTLADI+MTCNL  GF RIL KSFTSEFPHVERYFWTMVN
Sbjct:    1 MALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.832e-71
Identity = 132/195 (67.69%), Postives = 151/195 (77.44%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+V+H    NK A KALI AEY GV +E   +F+MGVTNK+PEFLKMNPIGKVPVLETP+GPIFESNAIARYV+R    N L GSSLI+ AHIEQWIDFSSLEID N+L+WF PR+G+A +   AEE             NTHLASNT+LVGHSVTLADI+  CNL LGF+ ++TK FTS FPHVERYFWTMVN
Sbjct:    1 MALVMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGPIFESNAIARYVSRKNGDNSLNGSSLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAPFSAPAEEAAISALKRGLEALNTHLASNTFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWTMVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 7.696e-70
Identity = 131/195 (67.18%), Postives = 149/195 (76.41%), Query Frame = 1
Query:  100 MAMVLHAGNTNKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGPIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            MA+VLH    NK+A KALI AEY GV +++  +F+MGVTNKTP FLKMNPIGKVPVLETP+G +FESNAIARYV+RL   N L GSSLI+ A IEQWIDFSSLEI  +ILRWF PR+GF  Y   AEE             NTHL SNTYLVGHS+TLADII  CNL LGF+ ++TK FTSEFPHVERYFWT+VN
Sbjct:    1 MALVLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGSVFESNAIARYVSRLNGDNSLNGSSLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMPYSAPAEEGAISTLKRALDALNTHLTSNTYLVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYFWTVVN 195          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30
Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 1
Query:  130 NKNAFKALITAEYTGVNVELVKNFEMGVTNKTPEFLKMNPIGKVPVLETPDGP-IFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            N  AFKALI A+Y+G  +E+ K+F  G TNK+  FLK  P+GKVP  E+ DG  I ESNAIA YVA       L GSS ++ A I QW+ F+  EI      W  P +G   +  QA               + HL + TYLVG  +TLADI++TC L   +  +L ++F   + +  R+F T++N
Sbjct:   12 NFRAFKALIAAQYSGAKLEIAKSFVFGETNKSDAFLKSFPLGKVPAFESADGHCIAESNAIAYYVAN----ETLRGSSDLEKAQIIQWMTFADTEILPASCTWVFPVLGIMQFNKQATARAKEDIDKALQALDDHLLTRTYLVGERITLADIVVTCTLLHLYQHVLDEAFRKSYVNTNRWFITLIN 193          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1GA_XENLA (Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-A PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 75/189 (39.68%), Postives = 105/189 (55.56%), Query Frame = 1
Query:  130 NKNAFKALITAEYTGVNVELVKN---FEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            N  A+K LI A+Y+G  +++  +   F+ GVTNKTPEFLK  P+GKVP  E  DG  +FES+AIA YV      + L G++ +  A + QW+ FS   I      W  P +G   Y  QA E             ++HL + T+LVG  +TLADI +TC+L   + ++L  SF   F +V R+F T VN
Sbjct:   12 NWRAYKPLIAAQYSGFPIKVASSAPEFQFGVTNKTPEFLKKFPLGKVPAFEGKDGFCLFESSAIAHYVGN----DELRGTTRLHQAQVIQWVSFSDSHIVPPASAWVFPTLGIMQYNKQATEQAKEGIKTVLGVLDSHLQTRTFLVGERITLADITVTCSLLWLYKQVLEPSFRQPFGNVTRWFVTCVN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 77/198 (38.89%), Postives = 105/198 (53.03%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  V ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             +THL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
BLAST of FC930801 vs. ExPASy Swiss-Prot
Match: EF1G_RAT (Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29
Identity = 76/198 (38.38%), Postives = 105/198 (53.03%), Query Frame = 1
Query:  103 AMVLHAGNTNKNAFKALITAEYTGVNVELVK---NFEMGVTNKTPEFLKMNPIGKVPVLETPDG-PIFESNAIARYVARLKAVNPLLGSSLIDSAHIEQWIDFSSLEIDTNILRWFIPRVGFAVYLPQAEEXXXXXXXXXXXXXNTHLASNTYLVGHSVTLADIIMTCNLTLGFSRILTKSFTSEFPHVERYFWTMVN 684
            A  L+    N  AFKALI A+Y+G  + ++    +F  G TN+TPEFL+  P GKVP  E  DG  +FESNAIA YV+       L GS+   +A + QW+ F+  +I      W  P +G   +  QA E             +THL + T+LVG  VTLADI + C L   + ++L  SF   FP+  R+F T +N
Sbjct:    3 AGTLYTYPENWRAFKALIAAQYSGAQIRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSN----EELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCIN 196          
The following BLAST results are available for this feature:
BLAST of FC930801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
EF1G_PRUAV2.086e-8376.92Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G2_ORYSJ1.266e-8074.36Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G1_ORYSJ1.185e-7871.79Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G3_ORYSJ1.547e-7873.33Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
EF1G2_ARATH1.832e-7167.69Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH7.696e-7067.18Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G_ARTSA2.676e-3040.32Elongation factor 1-gamma OS=Artemia salina PE=1 S... [more]
EF1GA_XENLA5.961e-3039.68Elongation factor 1-gamma-A OS=Xenopus laevis GN=e... [more]
EF1G_MOUSE1.734e-2938.89Elongation factor 1-gamma OS=Mus musculus GN=Eef1g... [more]
EF1G_RAT2.265e-2938.38Elongation factor 1-gamma OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34109B10EF PostHarvP1 Citrus clementina cDNA clone C34109B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930801 ID=FC930801; Name=FC930801; organism=Citrus clementina; type=EST; length=684bp
GACACTCACTAAACCTCGCAAGACCAAGCCGTTGACACAATCGCTCTGAT
TCGCTGTTTGATCTTGGGTTGTTAACTGAAGTAAAATCTTTCTGAAGCAA
TGGCTATGGTCTTGCATGCAGGGAACACCAATAAAAATGCTTTTAAAGCA
CTTATTACTGCAGAGTACACTGGGGTAAATGTTGAATTGGTCAAGAATTT
TGAGATGGGTGTAACAAACAAAACTCCTGAATTTCTTAAGATGAATCCCA
TTGGAAAGGTTCCTGTGTTGGAAACACCTGATGGACCCATCTTCGAGAGT
AATGCCATTGCACGATATGTTGCACGCTTGAAAGCTGTCAACCCACTGTT
GGGCTCGTCTTTAATTGATTCTGCTCATATTGAGCAGTGGATTGATTTCT
CATCATTAGAAATTGACACCAATATTTTGCGTTGGTTTATACCAAGAGTT
GGTTTCGCGGTGTACCTTCCTCAGGCTGAGGAAGCTGCAATTGCTTCTTT
GAAGAGAGCTCTAGCTGCATTGAATACACATCTCGCTTCCAACACTTACT
TAGTTGGCCATTCAGTGACTTTGGCTGATATCATTATGACATGTAACTTG
ACGTTGGGATTCAGTCGGATCCTGACCAAGAGCTTTACATCAGAATTCCC
TCACGTTGAGAGATACTTTTGGACAATGGTTAAC
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