FC930867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 73/209 (34.93%), Postives = 106/209 (50.72%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMG-RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRILSFV 719 LR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+ VPNL+M+E+V + K+A ++N + G +PLKV+VQ+NTSGE+SK G+ PS + +V+H + L FV Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLM-----------------------------------------------AVPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFV 178
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 75/209 (35.89%), Postives = 105/209 (50.24%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRILSFV 719 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+ VPNL M+E+V + K+A ++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H + L FV Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLM-----------------------------------------------AVPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFV 178
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 73/204 (35.78%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRL----------NRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKH 686 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K+ +L + +++WHFIG++QSNK K L V NL +VE+V N+KI +L N K L +++QVNTSGEESKSG +P CL+LVKH Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSKIL-----------------------------------------------TSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKH 166
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23 Identity = 74/209 (35.41%), Postives = 105/209 (50.24%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRILSFV 719 LR+V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+ VPNL ++E+V + K+AG++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H + L FV Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLM-----------------------------------------------AVPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFV 178
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22 Identity = 73/209 (34.93%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRILSFV 719 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+ VPNL+M+E+V + K+A ++N + G + LKV+VQ+NTSGE SK G+ P+ LV+H + L FV Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLM-----------------------------------------------AVPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFV 178
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 70/192 (36.46%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVK 683 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK AQ LEWHFIG LQSNK K L+A F ++++ +KIA RLN +KPL VL+Q+N S E+SKSG++P+ L+L K Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTK-----------------LVAEHF--------------------------------DWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAK 148
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 62/168 (36.90%), Postives = 83/168 (49.40%), Query Frame = 3 Query: 180 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVK 683 + +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K + A V NL +E++ EK A +N E + + PL V +QVNTSGEE+K GV PS LEL K Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKKI-----------------------------------------------ASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCK 143
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 67/193 (34.72%), Postives = 91/193 (47.15%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKH 686 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK +LEWHFIG LQSNK + L+A F ++++ KIA RLN T + PL VL+Q+N S EESKSG++P L L KH Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTR-----------------LVAEHF--------------------------------DWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKH 149
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19 Identity = 68/198 (34.34%), Postives = 92/198 (46.46%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQ 695 + + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSN KS L+A F V ++ KIA RLN KPL+VL+QVNTSGE SKSGV + EL + S+ Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSN-----------------KSRLVAEHF--------------------------------DWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR 155
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18 Identity = 64/194 (32.99%), Postives = 86/194 (44.33%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQ 695 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SV KIA RL+ G PL V +QVN SGE SKSG P L + Q Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI-------------------------------------------------AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ 151 The following BLAST results are available for this feature:
BLAST of FC930867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930867 ID=FC930867; Name=FC930867; organism=Citrus clementina; type=EST; length=726bpback to top |