FC930952

Overview
NameFC930952
Unique NameFC930952
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15288 contig Ccv1_Contig15288:337..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 442.58 bits (1137), Expect = 1.002e-123
Identity = 220/239 (92.05%), Postives = 229/239 (95.82%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAETQQGIFDAVLKGHIDF+SDPWPLIS+SAKDLIRKMLC QPSERLTAHEVLCHPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGL+EMFKAMDTD+SGAITFDELKAGLR+YGSTLKDTEIR+LMDAADVDNSGTIDYGEFIAATVHLNKLEREEHL+AAFQYFDKDGSGYITVDE+QQAC EHNMTDV   DIIREV    DGRID
Sbjct:  284 LYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISESAKDLIRKMLCMQPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDSSGAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLMAAFQYFDKDGSGYITVDEVQQACIEHNMTDVYFEDIIREVDQDNDGRID 522
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 438.343 bits (1126), Expect = 1.889e-122
Identity = 216/239 (90.38%), Postives = 228/239 (95.40%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAETQQGIFDAVLKGHIDF+SDPWPL+S+SAKDLIRKMLC +PSERLTAHEVLCHPWICENGVAPDR+LDPAVLSRLK FSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLR+YGSTLKD EIR+LMDAADVDNSGTIDYGEFIAAT+HLNKL+REEHL+AAFQYFDKDGSGYITVDELQQACA+HN+TDV   DIIREV    DGRID
Sbjct:  262 LYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLLSESAKDLIRKMLCMRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAATIHLNKLDREEHLMAAFQYFDKDGSGYITVDELQQACADHNITDVFFEDIIREVDQDNDGRID 500
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 1.955e-119
Identity = 212/239 (88.70%), Postives = 226/239 (94.56%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAETQQGIFDAVLKG+IDF++DPWP+ISDSAKDLIRKMLCS PSERLTAHEVL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+ MF+AMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM+AADVDNSGTIDY EFIAAT+HLNKLEREEHLV+AFQYFDKDGSGYIT+DELQQ+C EH MTDV L DII+EV    DGRID
Sbjct:  275 LYILLSGVPPFWAETQQGIFDAVLKGYIDFDTDPWPVISDSAKDLIRKMLCSSPSERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLRAMFEAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLEREEHLVSAFQYFDKDGSGYITIDELQQSCIEHGMTDVFLEDIIKEVDQDNDGRID 513
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 425.631 bits (1093), Expect = 1.267e-118
Identity = 210/239 (87.87%), Postives = 226/239 (94.56%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAETQQGIFDAVLKGHIDF+SDPWPLISDSAK+LIR MLCS+PSERLTAH+VL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLK+MALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLM+AAD+D SGTIDYGEFIAAT+HLNKLEREEHL++AF+YFDKDGSGYIT+DELQ ACAE  M+DV L D+I+EV    DGRID
Sbjct:  214 LYILVSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKNLIRGMLCSRPSERLTAHQVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKQMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQGMSDVFLEDVIKEVDQDNDGRID 452
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 424.476 bits (1090), Expect = 2.823e-118
Identity = 210/239 (87.87%), Postives = 225/239 (94.14%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAETQQGIFDAVLKG+IDFESDPWP+ISDSAKDLIR+ML S+P+ERLTAHEVL HPWICENGVAPDR+LDPAVLSRLKQFSAMNKLKKMAL+VIAESLSEEEIAGL+EMF+AMDTDNSGAITFDELKAGLR+YGSTLKDTEI DLMDAADVDNSGTIDY EFIAAT+HLNKLEREEHLVAAFQYFDKDGSG+IT+DELQQAC EH M DV L DII+EV    DG+ID
Sbjct:  287 LYILLSGVPPFWAETQQGIFDAVLKGYIDFESDPWPVISDSAKDLIRRMLSSKPAERLTAHEVLRHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALKVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIHLNKLEREEHLVAAFQYFDKDGSGFITIDELQQACVEHGMADVFLEDIIKEVDQNNDGKID 525
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 9.125e-101
Identity = 184/239 (76.99%), Postives = 206/239 (86.19%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LY+L SGVPPFWAETQQGIFDAVLKGHIDF+SDPWP ISDSAKDLIRKML   PSERL AHEVL HPWICENGVA D++LDP+V+SRLKQFSAMNKLKK+ALRVIAE LSEEEIAGL+EMFKA+DT N G ITF EL+ GLRR+G+  KDTEI D+M+AA  DN+ TI Y EFIAAT+ LNK+EREEHL+AAF YFDKDGSGYITVD+LQ+AC EHNM D LL +II EV    DG+ID
Sbjct:  269 LYVLLSGVPPFWAETQQGIFDAVLKGHIDFQSDPWPKISDSAKDLIRKMLSHCPSERLKAHEVLRHPWICENGVATDQALDPSVISRLKQFSAMNKLKKLALRVIAERLSEEEIAGLREMFKAVDTKNRGVITFGELREGLRRFGAEFKDTEIGDIMEAAHNDNNVTIHYEEFIAATLPLNKIEREEHLLAAFTYFDKDGSGYITVDKLQRACGEHNMEDSLLEEIISEVDQNNDGQID 507
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.044e-96
Identity = 174/239 (72.80%), Postives = 201/239 (84.10%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            +YIL SGVPPFWAET+QGIF+ VL G +DF SDPWP IS+SAKDL+RKML   P +RLTAH+VLCHPW+  +GVAPD+ LD AVLSR+KQFSAMNK KKMALRVIAESLSEEEIAGLKEMF  +D D SG ITF+ELKAGL+R G+ LK++EI DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKDGSGYIT DELQQAC E  + DV + +++R+V    DGRID
Sbjct:  340 VYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRID 578
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.781e-96
Identity = 169/239 (70.71%), Postives = 200/239 (83.68%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAET+ GIF  +L+G IDF+SDPWP IS+ AKDLI KML   P +R++AHE LCHPWI +   APD+ LDPAVLSRLKQFS MNK+KKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITF+ELKAGL+R GS L ++EI+ LMDAAD+DNSGTIDYGEF+AAT+H+NK+EREE+LV AF YFDKDGSGYIT+DELQQAC E  + D  L D+I+E+ +  DG+ID
Sbjct:  215 LYILLSGVPPFWAETESGIFRQILQGKIDFKSDPWPTISEGAKDLIYKMLDRSPKKRISAHEALCHPWIVDEHAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGLCDTPLDDMIKEIDLDNDGKID 453
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 5.182e-96
Identity = 173/239 (72.38%), Postives = 201/239 (84.10%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            LYIL SGVPPFWAE++ GIF  +L G +DF S+PWP ISDSAKDLIRKML   P  RLTAHEVL HPWI ++ +APD+ LD AVLSRLKQFSAMNKLKKMALRVIAE LSEEEI GLKE+FK +DTDNSG ITFDELK GL+R GS L ++EI+DLMDAAD+D SGTIDYGEFIAATVHLNKLEREE+LV+AF YFDKDGSGYIT+DE+QQAC +  + D+ + D+I+E+    DG+ID
Sbjct:  224 LYILLSGVPPFWAESEPGIFRQILLGKLDFHSEPWPSISDSAKDLIRKMLDQNPKTRLTAHEVLRHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQID 462
[Close]
BLAST of FC930952 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 1.508e-95
Identity = 172/239 (71.97%), Postives = 200/239 (83.68%), Query Frame = 1 
Query:    1 LYILPSGVPPFWAETQQGIFDAVLKGHIDFESDPWPLISDSAKDLIRKMLCSQPSERLTAHEVLCHPWICENGVAPDRSLDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACAEHNMTDVLL*DIIREVLIRYDGRID 717
            +YIL SGVPPFWAET+QGIF+ VL G +DF SDPWP IS+SAKDL+RKML   P  RLTAH+VLCHPW+  +GVAPD+ LD AVLSR+KQFSAMNK KKMALRVIAESLSEEEIAGLK+MFK +D DNSG ITF+ELKAGL+R G+ LK++EI DLM AADVDNSGTIDY EFIAAT+HLNK+ERE+HL AAF YFDKD SG+IT DELQQAC E  + D  + +++R+V    DGRID
Sbjct:  376 VYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRID 614
The following BLAST results are available for this feature:
BLAST of FC930952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CDPK4_SOLTU1.002e-12392.05Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPK5_SOLTU1.889e-12290.38Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK6_ARATH1.955e-11988.70Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPKQ_ARATH1.267e-11887.87Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK5_ARATH2.823e-11887.87Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPKB_ORYSJ9.125e-10176.99Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPK1_ARATH1.044e-9672.80Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK4_ARATH1.781e-9670.71Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPK_SOYBN5.182e-9672.38Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK2_ARATH1.508e-9571.97Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34110G09EF PostHarvP1 Citrus clementina cDNA clone C34110G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930952 ID=FC930952; Name=FC930952; organism=Citrus clementina; type=EST; length=718bp
CTGTATATATTGCCTAGTGGAGTGCCACCATTTTGGGCAGAAACACAACA
GGGAATATTTGATGCGGTGTTGAAGGGACACATTGACTTTGAGTCTGACC
CTTGGCCACTAATATCCGACAGCGCAAAAGACCTTATTCGGAAGATGTTA
TGCTCTCAACCATCAGAACGCCTGACTGCTCATGAAGTTTTATGTCATCC
CTGGATCTGTGAAAATGGAGTTGCTCCTGATAGGTCCCTTGATCCAGCTG
TACTTTCTCGTCTCAAACAATTCTCTGCAATGAATAAATTGAAAAAGATG
GCTTTACGGGTTATAGCTGAAAGCCTTTCTGAAGAGGAGATTGCTGGTTT
AAAGGAAATGTTCAAGGCCATGGATACTGACAATAGTGGTGCAATTACAT
TTGATGAACTCAAAGCTGGTTTACGAAGATATGGCTCTACCTTGAAGGAT
ACAGAGATACGTGATCTTATGGATGCGGCTGATGTGGACAATAGTGGAAC
TATTGATTATGGAGAATTTATAGCTGCAACTGTTCACCTCAATAAATTAG
AACGTGAGGAACATCTTGTTGCTGCATTCCAGTACTTCGACAAGGATGGA
AGTGGTTATATTACGGTTGATGAACTTCAGCAAGCATGTGCTGAACATAA
CATGACAGATGTTTTACTTTGAGATATAATCAGAGAAGTTTTGATCAGAT
ATGATGGAAGAATTGACT
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