FC930966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: C3H41_ORYSJ (E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.049e-40 Identity = 85/185 (45.95%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVK---------PXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFL------PPNKTAWNPESVCNDSLE---NDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHPFR 709 +KRVLCKFF HGACLKGE+CEFSHDW D PNN+CT+YQKG CSYGSRCRY+HVK P + +S L P + + ESV D ++ + V L PAD ICSFAA GNCP GE+CP +HGD C TCGK CLHP+R Sbjct: 3 TKRVLCKFFMHGACLKGEYCEFSHDWNDQPNNVCTFYQKGSCSYGSRCRYDHVKVSRNPTVAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPRQQISMDVLAHSGSKPVWRNDFQHESVLEDGIDWSISPTVQNQTTLSPADLPICSFAAGGNCPYGEECPQMHGDLCTTCGKMCLHPYR 187
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: C3H35_ARATH (E3 ubiquitin-protein ligase makorin OS=Arabidopsis thaliana GN=MKRN PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39 Identity = 79/171 (46.20%), Postives = 101/171 (59.06%), Query Frame = 2 Query: 206 MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRN---LKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHPFR 709 MS R+LCKFF HG+CLKGE+CEFSHD KDPPNN+CT+YQK C YGSRCRY+HV+ + +P + + +L R + P +N++ D+ N + P + ICSFAAAG+CPRG +CPH+HGD C TCGK CLHPFR Sbjct: 1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR-----------------------AASNLP-LSSDSESLDR------SISTTPSRHLQQQGDNNDGDKSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFR 141
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_HUMAN (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELS---ALSR------------------PFLPPNKTAWNPESVCND-----SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C +G++C +SHD D P ++ C Y+Q+G+C YG RCRYEH KP ++ + G + E++ A SR F+P C + S+ +E ++ + + +C +AA G C GE C ++HGD+C CG LHP Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKP-LKQEEATATELTTKSSLAASSSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHP 246
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_MOUSE (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 56/192 (29.17%), Postives = 85/192 (44.27%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNI-CTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELS---ALSR------------------PFLPPNKTAWNPESVCND-----SLENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C +G++C +SHD D P + C Y+Q+G+C YG RCRYEH KP ++ G + E++ A SR F+P C + S+ +E ++ + +C +AA G C GE C ++HGD+C CG LHP Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKP-LKQEEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHP 246
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_XENLA (Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis GN=mkrn2 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 58/201 (28.86%), Postives = 83/201 (41.29%), Query Frame = 2 Query: 212 KRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFLP-----PNKT-AWNPESVCNDSLEN------------------------------DEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 K+V C++F HG C +G C FSHD P+ +C ++ +G C+YG+RCRY+HVKP + P + P A P +P KT +C S++ DE +P + A + +C FA AG C G+ CP++HGD C CG LHP Sbjct: 4 KQVTCRYFLHGVCREGSRCLFSHDLATSKPSTVCRFFLRGQCAYGTRCRYDHVKPCNGTVFIPPQEMSP---------VLSPPPLFPAQEAAVPPTIPAPQRREKKTLVLRDRDLCGASVDPALQPGCITESQGSEGEAKPHSYLEAICTGLDESQDPASYPGAPQQLCPFAQAGECHCGDSCPYLHGDACEICGLQVLHP 195
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_MOUSE (Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus GN=Mkrn2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXG------ITKV-------PGVMPE---------LSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRS----------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHPF 706 +K+V C++F HG C +G C FSHD + P+ IC YYQKG+C+YG+RCRY+H KP T V PG + L+ L+ PP+K N C+D + E+ +P + A R+ +C +AAAG C G+ C ++HGD C C LHPF Sbjct: 3 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKPPAAAGGAVGPAPNPSPSSGLHSPHPSPDIATSVMRTHSNEPGKREKKTLVLRDRNLTGLAEDKTPPSKV--NNPGGCSDPQTSPEM-KPHSYLDAIRTGLDDLEASSSYSNEPQLCPYAAAGECRLGDACVYLHGDMCEICRLQVLHPF 204
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN2_DANRE (Probable E3 ubiquitin-protein ligase makorin-2 OS=Danio rerio GN=mkrn2 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 62/204 (30.39%), Postives = 85/204 (41.67%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSA---LSRPFLPPNKTAWNPESVCNDSLENDEVDE-----------PRNLKPADRS------------------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C +G C FSHD P+ IC YYQ+G C+YG RCRY+H+KP PG P + L +P + +K + S E+ E++E P + A RS IC F AAG C GE CP++HG+ C C + LHP Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKPPGRGSGAPADHSNRSSSSAG----ASAPGPGPPANTSKHLKKPLVLRDKALCSDSRPRVFSAESSELNECWEQRDDGAQKPHSYLEAIRSGLDASAAAAATAGTFPELQQTSPQICPFLAAGQCQYGESCPYLHGEMCEICRQHVLHP 202
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_SERQU (Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola quinqueradiata GN=mkrn1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 58/178 (32.58%), Postives = 79/178 (44.38%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKD--PPNNICTYYQKGFCSYGSRCRYEHVKP------XXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFLPPNKTAWNPESVCNDSL-----ENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K V C++F HG C +G++C +SHD + P IC ++QKG C +G RCR+EH KP G T VPG ++A F+P E +S E D P N K + +C +AA G C G C ++HGD C CG LHP Sbjct: 19 TKHVTCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEHCKPAKNEELPAPQMLPLPSASLAGPSDPEPSGPTPVPGAQDWVNAAE--FVPGQPYCGRAEQAKVESSVPLIEEFDSYPAPDN-KQLRKQLCPYAAVGECRYGINCAYLHGDVCYMCGLQVLHP 193
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_MACEU (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.982e-20 Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSR------------------------PFLPPNKTAWNPESVCNDS-----LENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 +K+V C++F HG C KG +C +SHD + +C YYQ+G C+YG RCRYEH KP + +P ++ L+ +S F+P C ++ + +E+++ + + +C +AA G C GE C ++HGD C CG LHP Sbjct: 52 TKQVTCRYFMHGVCKKGNNCRYSHDLSTSQSAMVCRYYQRGCCAYGDRCRYEHTKP----LKREEVTAANLAAKSDLPASSSLPALVEPLAEVSTGEAESVNSNFAAAGAGGEDWVNAIEFVPGQPYCGRAAPSCTEAPLQGMVIEEELEKQQTNVEMKKQLCPYAAVGECRYGENCVYLHGDACDMCGLQVLHP 242
BLAST of FC930966 vs. ExPASy Swiss-Prot
Match: MKRN1_XENLA (Probable E3 ubiquitin-protein ligase makorin-1 OS=Xenopus laevis GN=mkrn1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.740e-19 Identity = 58/185 (31.35%), Postives = 80/185 (43.24%), Query Frame = 2 Query: 209 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYGSRCRYEHVKPXXXXXXXXXXXXXXXXXXXXXXGITKVPGVMPELSALSRPFLPPNKTAW---------------NPESVCNDSLENDEVDEPRNLKPAD----RSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLHP 703 ++ V C++F HG C +G +C +SHD + IC Y+Q+G C+YG RCRYEH KP I EL+A P W PE+ +++ DE E +PAD + +C +AA G C GE C ++HGD C CG LHP Sbjct: 35 TRHVTCRYFIHGVCKEGINCRYSHDLATSRSAMICRYFQRGCCAYGDRCRYEHNKPLQEDPTGDTCTAPSESLPEPSGNINSKAA---ELAASELASGGPRAQDWVNAVEFVPGQLYSGRAPEAYTQGTVKPDEGRE----EPADPELKKQLCPYAAMGECRYGENCVYLHGDPCDMCGLQVLHP 212 The following BLAST results are available for this feature:
BLAST of FC930966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930966 ID=FC930966; Name=FC930966; organism=Citrus clementina; type=EST; length=709bpback to top |