FC931008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931008 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.328e-59 Identity = 116/212 (54.72%), Postives = 150/212 (70.75%), Query Frame = 1 Query: 97 MACSSAALRTISSASVKLANSTSLTKSSSIL-VPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKAVYTFYL 726 M +S+A +IS +++ + + S+ L +N + + P L + F ++S+D RPTK+QEL+VYE NE DR SPA L+L +KP LGDLVPF+NKLYTGDL KR+GITAG+C+LI++ PEKKGDR+EA+YSFYFGDYGHI+VQGPYLTYEDT+LA+TGGSG+FEG YGQVKL+QLV+P K YTFYL Sbjct: 1 MIMASSAAASISMITLRNLSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYL 212
BLAST of FC931008 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.509e-58 Identity = 123/219 (56.16%), Postives = 157/219 (71.69%), Query Frame = 1 Query: 97 MACSSAALRTISSASVKLANSTSLTKSS--SILVPFK--LNNPSLITQCPHL----QAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKAVYTFYL 726 MA SSAA+ ++ S S+ N+ S S S L+ F N + + P ++ TS N V + F + +++ RP+K+QEL+VYE+NE DR SPA L+L +KP LGDLVPF+NKLYTGDL+KRVGITAG+C+LI++ PEK GDR+EA+YSFYFGDYGH++VQG YLTYEDT+LAVTGGSGIFEG YGQVKL+QLV+P K YTFYL Sbjct: 1 MASSSAAM-SLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFW--NWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYL 216
BLAST of FC931008 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.391e-58 Identity = 119/213 (55.87%), Postives = 152/213 (71.36%), Query Frame = 1 Query: 97 MACSSAALRTISSASVKLANSTSLTKSSSILVPFK-LNNPSLITQCPHLQAATSCNFTVPKRSFTCR--SQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKAVYTFYL 726 MA S+ +L++IS ++ + SS+L K N + + +S FT K R SQ + ++PRP+KVQEL VYEINE DR SP L+ + + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEKKG+R+EATYSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P K YTFYL Sbjct: 1 MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGISSNGSDFSYPSS--FTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 211
BLAST of FC931008 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.782e-58 Identity = 118/214 (55.14%), Postives = 155/214 (72.43%), Query Frame = 1 Query: 97 MACSSAALRTISSASVK-LANSTSLTKSSSILVPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANS---SDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKAVYTFYL 726 MA S+ +L++IS ++ L+ S +SS + N + + P + TS FT K+ R+ + + +++PRP+KVQEL VYEIN+ DR SP L+ + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEK GDR+EATYSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P K YTFYL Sbjct: 1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSFQNFGISSNGPGSSSPTS--FTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 212 The following BLAST results are available for this feature:
BLAST of FC931008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931008 ID=FC931008; Name=FC931008; organism=Citrus clementina; type=EST; length=727bpback to top |