FC931013

Overview
NameFC931013
Unique NameFC931013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length321
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig164 contig Ccv1_Contig164:386..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.122e-51
Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA +AFVELADA GYA+AVMPSAKG+VPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKA+I+ PDRVVIANGPAFGCVLM DF
Sbjct:   66 KASDAFVELADASGYALAVMPSAKGMVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVMPDRVVIANGPAFGCVLMNDF 170
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.914e-51
Identity = 95/105 (90.48%), Postives = 100/105 (95.24%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA +AFVEL+DACGYAVAVMPSAKGL PEHH HFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKA+I+QPDRV I NGPAFGCVLM+DF
Sbjct:  171 KASDAFVELSDACGYAVAVMPSAKGLFPEHHSHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVTIGNGPAFGCVLMRDF 275
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.527e-48
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AFV+L DA GYA AVMPSAKGLVPE HPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYS LLKK+KA+I+QP+RV++ NGPAFGCV+MK+F
Sbjct:  267 KAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEF 371
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 7.527e-48
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AFV+L DA GYA AVMPSAKGLVPE HPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYS LLKK+KA+I+QP+RV++ NGPAFGCV+MK+F
Sbjct:  267 KAGKAFVDLVDASGYAYAVMPSAKGLVPETHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSFLLKKDKAIIVQPERVIVGNGPAFGCVMMKEF 371
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.284e-47
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KAC+AFVELAD+ GYA+AVM   KGLV E HPHFIGTYWGAV T++CAEIVESADAYLFAGPIFNDYSSVGYSLL+KKEK++I+QPDRVVI NGPAFGCVLMKDF
Sbjct:  249 KACDAFVELADSSGYAMAVMLQPKGLVAEQHPHFIGTYWGAVGTSYCAEIVESADAYLFAGPIFNDYSSVGYSLLIKKEKSIIVQPDRVVIGNGPAFGCVLMKDF 353
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.087e-46
Identity = 89/105 (84.76%), Postives = 95/105 (90.48%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AFV+LADA GYAVA MPSAKGLVPE  P FIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYS LLKKEKAV++QPDRV + NGPAFGCV+M+DF
Sbjct:  247 KAGGAFVDLADASGYAVAAMPSAKGLVPETLPRFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSCLLKKEKAVVVQPDRVTVGNGPAFGCVMMRDF 351
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.420e-46
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AF  +A++ GY +AVMPSAKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYSSVGYSLLLK+EKAVI+QPDRVV+ NGPAFGC+LM +F
Sbjct:  266 KAKKAFAGIAESSGYPIAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEF 370
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.130e-46
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AFV+LADA G+AVA MPSAKGLVPE  P FIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYS LLKKEKAV++QPDRV + NGPAFGCV+M+DF
Sbjct:  247 KAGGAFVDLADASGHAVAAMPSAKGLVPETLPRFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSCLLKKEKAVVVQPDRVTVGNGPAFGCVMMRDF 351
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 4.130e-46
Identity = 86/105 (81.90%), Postives = 94/105 (89.52%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AF  +A++ GY  AVMPSAKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYSSVGYSLLLK+EKAVI+QPDRVV+ NGPAFGC+LM +F
Sbjct:  266 KAKKAFAGIAESSGYPFAVMPSAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRVVVGNGPAFGCILMTEF 370
[Close]
BLAST of FC931013 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.202e-45
Identity = 85/105 (80.95%), Postives = 94/105 (89.52%), Query Frame = 2 
Query:    5 KACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKKEKAVILQPDRVVIANGPAFGCVLMKDF 319
            KA  AF  +ADA GY  AVMP+AKGLVPEHHP FIGTYWGAVST FCAEIVESADAYLFAGPIFNDYSSVGYSLLLK+EKAVI+QPDR+V+ +GPAFGC+LM +F
Sbjct:  271 KAREAFAAVADASGYPFAVMPAAKGLVPEHHPRFIGTYWGAVSTTFCAEIVESADAYLFAGPIFNDYSSVGYSLLLKREKAVIVQPDRMVVGDGPAFGCILMPEF 375
The following BLAST results are available for this feature:
BLAST of FC931013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PDC2_PEA1.122e-5191.43Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pis... [more]
PDC1_TOBAC1.914e-5190.48Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC2_ORYSJ7.527e-4883.81Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI7.527e-4883.81Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_TOBAC1.284e-4783.81Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC3_ORYSI1.087e-4684.76Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_ORYSI1.420e-4681.90Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC3_ORYSJ4.130e-4683.81Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_ORYSJ4.130e-4681.90Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_MAIZE1.202e-4580.95Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]

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Properties
Property NameValue
Genbank descriptionC34100E02EF PostHarvP1 Citrus clementina cDNA clone C34100E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931013 ID=FC931013; Name=FC931013; organism=Citrus clementina; type=EST; length=321bp
GGACAAGGCTTGCAATGCTTTCGTTGAGCTTGCTGATGCTTGTGGCTACG
CCGTTGCGGTGATGCCATCAGCGAAAGGGCTAGTACCAGAGCACCATCCC
CATTTTATTGGAACTTATTGGGGTGCCGTGAGCACTGCTTTTTGTGCTGA
AATTGTGGAATCTGCTGATGCTTATTTGTTTGCTGGACCTATATTTAATG
ACTATAGCTCGGTTGGGTACTCTCTTCTTCTCAAGAAGGAGAAGGCAGTC
ATTCTGCAGCCTGATCGTGTGGTGATTGCTAATGGACCGGCATTTGGTTG
TGTTTTGATGAAGGATTTCCT
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