FC931023

Overview
NameFC931023
Unique NameFC931023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15258 contig Ccv1_Contig15258:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 409.068 bits (1050), Expect = 1.144e-113
Identity = 212/229 (92.58%), Postives = 216/229 (94.32%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFEKAKSKA CIVFIDEIDAV           NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR+KILQVHSRGKAL KDVDFEKI+RRTPG+TGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  331 ASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 559          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.951e-113
Identity = 212/229 (92.58%), Postives = 216/229 (94.32%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFEKAKSKA CIVFIDEIDAV           NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF+KI+RRTPGFTG DLQNLMNEAAILAARRDLKEISKDEI+DALERIIAGPEKKNAVVS+EKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  331 ASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 559          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 406.371 bits (1043), Expect = 7.415e-113
Identity = 210/229 (91.70%), Postives = 216/229 (94.32%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFEKAKSKA CIVFIDEIDAV           NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKAL KDVDF+K++RRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVS+EKK+LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  340 ASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 568          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.265e-112
Identity = 211/229 (92.14%), Postives = 215/229 (93.89%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVR LFE AKSKA CIVFIDEIDAV           NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPG+FDRQVTVDRPDVAGRV+ILQVHSRGKALAKDVDF+KI+RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  308 ASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 536          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.652e-112
Identity = 209/229 (91.27%), Postives = 217/229 (94.76%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFEKAK+KA CIVFIDEIDAV           NDEREQTINQLLTEMDGF+GNSGVIVLAATNRPDVLD+ALLRPGRFDRQVTVDRPDVAGRVKIL+VHSRGKALAKDVDFEKI+RRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVS+EK++LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  310 ASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 538          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.071e-111
Identity = 207/229 (90.39%), Postives = 216/229 (94.32%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFEKAKSKA CIVFIDEIDAV           NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV+IL+VHSRGKA+ KDVD+EK++RRTPGFTGADLQNLMNEAAILAARR+LKEISKDEISDALERIIAGPEKKNAVVS+EKK+LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG
Sbjct:  328 ASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 556          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.306e-96
Identity = 171/229 (74.67%), Postives = 202/229 (88.21%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESG 687
            ASRVRDLFE+AK+ A CIVFIDEIDAV           NDEREQT+NQLLTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VDRPD AGR +IL VH+RGK L++DVD +KI+RRTPGFTGADL NL+NEAAILAARR+L EIS DE++DA++R++AGPEKKN V+S+++K LVAYHEAGHALVGALMP+YDPV KISIIPRG+AGGLT+F PSE+R+ESG
Sbjct:  239 ASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESG 467          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.254e-76
Identity = 140/225 (62.22%), Postives = 177/225 (78.67%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 675
            ASRVRDLF+KAK  A C++FIDEIDAV           NDEREQT+NQLLTEMDGF GN+G+I++AATNRPDVLDSAL+RPGRFDRQV VD PD +GR +IL+VH+R K LA +V  + I+RRTPGF+GADL NL+NEAAIL ARR    I+  EI DA++R++AG E    +V  + K+L+AYHE GHA+VG L+ ++DPV K+++IPRGQA GLT+F P+EE+
Sbjct:  250 ASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGME-GTPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQ 473          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.109e-75
Identity = 140/225 (62.22%), Postives = 177/225 (78.67%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 675
            ASRVRDLF+KAK  + CIVFIDEIDAV           NDEREQT+NQLLTEMDGF GN+G+I++AATNR DVLD+ALLRPGRFDRQVTVD PDV GR++IL VH+R K L   +  E I++RTPGF+GADL NL+NEAAIL ARR  K+I+  EI  +++R+IAG E K A+V  + K+L+AYHE GHA++G L+  +DPV K++++PRGQA GLT+F PSE++
Sbjct:  251 ASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGK-ALVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAKGLTWFTPSEDQ 474          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.699e-75
Identity = 140/225 (62.22%), Postives = 173/225 (76.89%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 675
            ASRVRDLF+KAK  A C+VFIDEIDAV           NDEREQT+NQLLTEMDGF GNSG+IV+AATNRPDVLD ALLRPGRFDRQVTVD PDV GR  IL +H++ K L ++V    I+RRTPGFTGADL N++NEAAI  ARR  + I+  E++DA++R++AG E    +V  + K+L+AYHE GHAL+G L P +DPV K+++IPRGQA GLT+F P E++
Sbjct:  289 ASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGME-GTPLVDSKSKRLIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQ 512          
The following BLAST results are available for this feature:
BLAST of FC931023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
FTSH_TOBAC1.144e-11392.58Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_MEDSA1.951e-11392.58Cell division protease ftsH homolog, chloroplastic... [more]
FTSH1_ARATH7.415e-11391.70Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_CAPAN1.265e-11292.14Cell division protease ftsH homolog, chloroplastic... [more]
FTSH1_ORYSJ1.652e-11291.27Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ARATH1.071e-11190.39Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH4_SYNY36.306e-9674.67Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH1_SYNY33.254e-7662.22Cell division protease ftsH homolog 1 OS=Synechocy... [more]
FTSH_GUITH2.109e-7562.22Cell division protease ftsH homolog OS=Guillardia ... [more]
FTSH2_SYNY34.699e-7562.22Cell division protease ftsH homolog 2 OS=Synechocy... [more]

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Properties
Property NameValue
Genbank descriptionC34100E12EF PostHarvP1 Citrus clementina cDNA clone C34100E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931023 ID=FC931023; Name=FC931023; organism=Citrus clementina; type=EST; length=687bp
GCATCCAGAGTGAGGGATTTGTTTGAGAAGGCCAAATCGAAGGCACTGTG
TATTGTGTTTATTGATGAAATTGATGCTGTGGGGAGACAGAGAGGAGCAG
GGCTTGGAGGAGGAAACGATGAAAGAGAGCAGACTATTAATCAGCTTTTG
ACTGAAATGGATGGCTTTTCTGGTAATTCTGGTGTTATTGTATTGGCTGC
TACTAATAGGCCGGATGTTCTTGATTCTGCTTTGTTGAGGCCTGGGAGAT
TTGACAGGCAGGTTACAGTGGATAGGCCTGATGTTGCTGGTAGGGTTAAA
ATTCTTCAGGTGCACTCCAGAGGAAAGGCACTTGCTAAGGATGTGGACTT
TGAAAAAATTTCTAGAAGAACACCAGGTTTTACTGGAGCTGATCTGCAGA
ACCTGATGAATGAAGCAGCCATTCTTGCAGCCAGGCGTGACCTCAAGGAG
ATAAGCAAAGATGAGATATCCGATGCTCTAGAGAGGATCATTGCTGGACC
AGAGAAGAAAAATGCAGTTGTCTCTGATGAGAAGAAGAAATTAGTAGCCT
ACCACGAGGCTGGCCATGCTTTAGTTGGGGCTCTCATGCCTGAATATGAT
CCTGTAGCCAAGATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTAC
CTTTTTCGCTCCAAGTGAAGAGAGGCTTGAGTCTGGA
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