FC931028

Overview
NameFC931028
Unique NameFC931028
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13126 contig Ccv1_Contig13126:422..1093. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.216e-109
Identity = 185/222 (83.33%), Postives = 204/222 (91.89%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVA 672
            ELVWIV WWAGVKI++F D ET+  MGKEHALVV NH+SDIDWLVGW+L+QRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNW KDESTLKSGLQRL D+P+PFWLALFVEGTRFT+AKL AAQEYAAS+ LPIPRNVLIPRTK FVSAVS+MRSFVPAIYD+TV IPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE+DDA+AQWCRD FVA
Sbjct:   55 ELVWIVDWWAGVKIQVFADNETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLSDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPIPRNVLIPRTKSFVSAVSNMRSFVPAIYDMTVTIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPESDDAIAQWCRDQFVA 276          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.809e-108
Identity = 183/222 (82.43%), Postives = 205/222 (92.34%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVA 672
            ELVWIV WWAGVKI++F D ET+  MGKEHALVV NH+SDIDWLVGW+L+QRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNW KDESTLKSGLQRL D+P+PFWLALFVEGTRFT+AKL AAQEYAA++ LP+PRNVLIPRTKGFVSAVS+MRSFVPAIYD+TVAIPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE++D +AQWCRD FVA
Sbjct:   56 ELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLNDFPRPFWLALFVEGTRFTEAKLKAAQEYAATSQLPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDMTVAIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPESEDEIAQWCRDQFVA 277          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 4.029e-108
Identity = 183/222 (82.43%), Postives = 204/222 (91.89%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVA 672
            ELVWIV WWAGVKI++F D ET+  MGKEHALVV NH+SDIDWLVGW+L+QRSGCLGS LAVMKKSSKFLPVIGWSMWFSEYLFLERNW KDESTL+SGLQRL D+P+PFWLALFVEGTRFT+AKL AAQEYAAS+ LP+PRNVLIPRTKGFVSAVS+MRSFVPAIYD+TVAIPK+SP PTM+RLFKGQ SV+HVH+K H MK+LPE +D +AQWCRD FVA
Sbjct:   55 ELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLQSGLQRLNDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDMTVAIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDLPEPEDEIAQWCRDQFVA 276          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.069e-104
Identity = 172/222 (77.48%), Postives = 200/222 (90.09%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFVA 672
            +LVW+V WWAGVK++L  D ETYR MGKEHAL++SNH+SDIDWL+GW+L+QRSGCLGSTLAVMKKSSKFLPVIGWSMWF+EYLFLER+W KDE TLK GLQRL+D+P+PFWLALFVEGTRFT AKLLAAQEYAAS GLP PRNVLIPRTKGFVSAVS MR FVPAIYD TV +PK SP PTM+R+ KGQSSV+HV +KRH M E+P++D+ V++WC+D+FVA
Sbjct:   56 QLVWVVDWWAGVKVQLHADEETYRSMGKEHALIISNHRSDIDWLIGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFAEYLFLERSWAKDEKTLKWGLQRLKDFPRPFWLALFVEGTRFTPAKLLAAQEYAASQGLPAPRNVLIPRTKGFVSAVSIMRDFVPAIYDTTVIVPKDSPQPTMLRILKGQSSVIHVRMKRHAMSEMPKSDEDVSKWCKDIFVA 277          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: LPAT3_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=LPAT3 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.373e-92
Identity = 148/221 (66.97%), Postives = 188/221 (85.07%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMFV 669
            +L+W+  WWA +KI L+VD ET  L+GKEHALV+SNH+SDIDWL+GWV++QR GCLGS+LA+MKK +K+LP+IGWSMWFS+Y+FLER+W KDE+TLK+G +RL D+P  FWLALFVEGTRFTQ KL AAQEYA+   LP PRNVLIPRTKGFVSAVS +RSFVPAIYD T+ +  + P PT++R+F GQSS +++ ++RH M ELPETDD +AQWC+D+F+
Sbjct:   56 QLIWLFDWWACIKINLYVDAETLELIGKEHALVLSNHRSDIDWLIGWVMAQRVGCLGSSLAIMKKEAKYLPIIGWSMWFSDYIFLERSWAKDENTLKAGFKRLEDFPMTFWLALFVEGTRFTQEKLEAAQEYASIRSLPSPRNVLIPRTKGFVSAVSEIRSFVPAIYDCTLTVHNNQPTPTLLRMFSGQSSEINLQMRRHKMSELPETDDGIAQWCQDLFI 276          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: PLCC_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Pongo abelii GN=AGPAT3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.176e-45
Identity = 83/220 (37.73%), Postives = 137/220 (62.27%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMF 666
            +LV ++ WW+  +  LF D+ T    GKEHA+++ NH  +ID+L GW + +R G LGS+  + KK   ++P+IGW+ +F E +F +R W +D  T+  GL+RL DYP+  W  L+ EGTRFT+ K   + E AA+ GLP+ +  L+PRTKGF +AV  +R  V A+YDVT+   + +  P+++ +  G+     + ++R  ++++P  +   AQW   ++
Sbjct:   60 QLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNF-RGNKNPSLLGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLY 278          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: PLCC_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Homo sapiens GN=AGPAT3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.176e-45
Identity = 83/220 (37.73%), Postives = 137/220 (62.27%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMF 666
            +LV ++ WW+  +  LF D+ T    GKEHA+++ NH  +ID+L GW + +R G LGS+  + KK   ++P+IGW+ +F E +F +R W +D  T+  GL+RL DYP+  W  L+ EGTRFT+ K   + E AA+ GLP+ +  L+PRTKGF +AV  +R  V A+YDVT+   + +  P+++ +  G+     + ++R  ++++P  +   AQW   ++
Sbjct:   60 QLVMLLEWWSCTECTLFTDQATVERFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKKELLYVPLIGWTWYFLEIVFCKRKWEEDRDTVVEGLRRLSDYPEYMWFLLYCEGTRFTETKHRVSMEVAAAKGLPVLKYHLLPRTKGFTTAVKCLRGTVAAVYDVTLNF-RGNKNPSLLGILYGKKYEADMCVRRFPLEDIPLDEKEAAQWLHKLY 278          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: PLCD_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Pongo abelii GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 82/220 (37.27%), Postives = 137/220 (62.27%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMF 666
            +LV ++ WW+G +  +F D   Y   GKE+A+VV NHK +ID+L GW LS+R G LG +  + KK   ++P+IGW  +F+E +F  R W +D  T+ + LQ LRDYP+ ++  +  EGTRFT+ K   + + A + GLP  ++ L+PRTKGF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++
Sbjct:   60 QLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLY 278          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: PLCD_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Homo sapiens GN=AGPAT4 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 82/220 (37.27%), Postives = 137/220 (62.27%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMF 666
            +LV ++ WW+G +  +F D   Y   GKE+A+VV NHK +ID+L GW LS+R G LG +  + KK   ++P+IGW  +F+E +F  R W +D  T+ + LQ LRDYP+ ++  +  EGTRFT+ K   + + A + GLP  ++ L+PRTKGF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++
Sbjct:   60 QLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLLPRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDECSAWLHKLY 278          
BLAST of FC931028 vs. ExPASy Swiss-Prot
Match: PLCD_MACFA (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Macaca fascicularis GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.001e-44
Identity = 81/220 (36.82%), Postives = 136/220 (61.82%), Query Frame = 1
Query:    7 ELVWIVYWWAGVKIKLFVDRETYRLMGKEHALVVSNHKSDIDWLVGWVLSQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWVKDESTLKSGLQRLRDYPQPFWLALFVEGTRFTQAKLLAAQEYAASTGLPIPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMIRLFKGQSSVMHVHLKRHLMKELPETDDAVAQWCRDMF 666
            +LV ++ WW+G +  +F D   Y   GKE+A+VV NHK +ID+L GW LS+R G LG +  + KK   ++P+IGW  +F+E +F  R W +D  T+ + LQ LRDYP+ ++  +  EGTRFT+ K   + + A + GLP  ++  +PRTKGF   V  +R+ V A+YD T+   +++  PT++ +  G+     ++++R  ++++PE DD  + W   ++
Sbjct:   60 QLVMLLEWWSGTECTIFTDPRAYPKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHPLPRTKGFAITVRSLRNVVSAVYDCTLNF-RNNENPTLLGVLNGKKYHADLYVRRIPLEDIPEDDDRCSAWLHKLY 278          
The following BLAST results are available for this feature:
BLAST of FC931028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
LPAT2_ARATH6.216e-10983.331-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRAOL1.809e-10882.431-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRANA4.029e-10882.431-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT_MAIZE2.069e-10477.481-acyl-sn-glycerol-3-phosphate acyltransferase PLS... [more]
LPAT3_ARATH2.373e-9266.971-acyl-sn-glycerol-3-phosphate acyltransferase 3 O... [more]
PLCC_PONAB2.176e-4537.731-acyl-sn-glycerol-3-phosphate acyltransferase gam... [more]
PLCC_HUMAN2.176e-4537.731-acyl-sn-glycerol-3-phosphate acyltransferase gam... [more]
PLCD_PONAB1.080e-4437.271-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_HUMAN1.080e-4437.271-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_MACFA7.001e-4436.821-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]

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Properties
Property NameValue
Genbank descriptionC34100F05EF PostHarvP1 Citrus clementina cDNA clone C34100F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931028 ID=FC931028; Name=FC931028; organism=Citrus clementina; type=EST; length=672bp
CCGGGGGAACTTGTATGGATTGTTTATTGGTGGGCTGGAGTTAAGATCAA
ACTTTTCGTAGACCGTGAAACGTATCGATTAATGGGTAAAGAACATGCAC
TTGTTGTTTCCAATCACAAAAGTGACATTGACTGGCTTGTTGGGTGGGTT
TTGTCTCAGCGGTCAGGTTGTCTTGGTAGCACATTGGCCGTTATGAAGAA
ATCATCAAAATTTCTTCCGGTCATAGGTTGGTCAATGTGGTTTTCTGAGT
ATCTCTTTCTGGAAAGAAACTGGGTAAAGGATGAGAGCACATTAAAGTCA
GGTCTCCAACGTCTAAGAGACTACCCTCAACCCTTTTGGCTAGCTCTCTT
TGTAGAAGGAACTCGATTTACACAGGCTAAGCTTTTAGCAGCTCAGGAAT
ATGCTGCTTCAACAGGATTGCCTATTCCTAGAAATGTTTTAATTCCTCGT
ACTAAGGGATTTGTTTCAGCAGTGAGTCATATGCGCTCATTTGTCCCAGC
CATTTACGATGTAACAGTAGCCATTCCTAAGAGTTCACCTGCACCTACAA
TGATCAGACTCTTCAAGGGCCAATCTTCTGTGATGCACGTGCACCTCAAA
AGGCATTTGATGAAGGAATTGCCTGAAACAGATGATGCTGTTGCACAATG
GTGTAGAGATATGTTCGTGGCC
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