FC931050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931050 vs. ExPASy Swiss-Prot
Match: ATL5P_ARATH (RING-H2 finger protein ATL5P OS=Arabidopsis thaliana GN=ATL5P PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 2 Query: 80 AFEAAGQEMRGIGQDTAAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEVRGLP-CAHNFHIECIDEWLRLNVKCPRCR 367 A +A Q G + H ++ TA + + +PK R+ + C +CL++F VG VR LP C H FH+ CID+WLR + CP CR Sbjct: 122 AMLSAVQSQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
BLAST of FC931050 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 146 LYLTAAQREAVEALIQELPKFRL-------------KAVPTDC--------------SECPICLEEFHVGNEVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPN 385 LY A Q A + I ++PKFR + + T+C +EC ICL E+ G E+R LPC H+FH CID+WL +N +CP C+ ++ N Sbjct: 279 LYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNILKN 385
BLAST of FC931050 vs. ExPASy Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe GN=SPAP32A8.03c PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 39/119 (32.77%), Postives = 58/119 (48.74%), Query Frame = 2 Query: 239 ECPICLEEFHVGNEVRGLPCAHNFHIECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRTADSERSS--ASSVVATTRYVRTQPSSQSYLVRMQGLLSPVHTGNTRLPNDTDIALQTVE 589 EC IC+E F + ++V LPC H FH CI WLR+N C CR V PN ++ +A+ S A+ +TT ++S+ Q LS H ++R P D + + +E Sbjct: 395 ECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQRNNTSTDSANGHNPSNHANPSTSTTNDQGATLRNESFNAASQSNLSSEHGHSSRTPMDDFVDEEPLE 513 The following BLAST results are available for this feature:
BLAST of FC931050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931050 ID=FC931050; Name=FC931050; organism=Citrus clementina; type=EST; length=708bpback to top |