FC931051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.693e-33 Identity = 60/86 (69.77%), Postives = 68/86 (79.07%), Query Frame = 2 Query: 5 ALKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIEXXXXXXXXXXXXKRVL 262 AL ++HIIG LDG SVQQAL+EN+LY+LD+HDI+LPFLDRINALDGRKAYATRTIFFL LG LKP+AIE KRVL Sbjct: 461 ALTDDHIIGHLDGFSVQQALEENRLYMLDYHDIFLPFLDRINALDGRKAYATRTIFFLTRLGTLKPVAIELSLPPHGPKHRSKRVL 546 HSP 2 Score: 41.5874 bits (96), Expect = 3.693e-33 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 276 DATSNWLWQIAKAHVCSND 332 DATSNW+WQ+AKAHV SND Sbjct: 551 DATSNWMWQLAKAHVSSND 569
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.940e-31 Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 2 Query: 5 ALKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 AL E+HIIGQLDG++VQQAL+ N+L+++D+HDIYLPFLDRINALDGRKAYATRTI FL LG LKPIAIE Sbjct: 467 ALTEDHIIGQLDGLTVQQALETNRLFMVDYHDIYLPFLDRINALDGRKAYATRTILFLTRLGTLKPIAIE 536 HSP 2 Score: 40.817 bits (94), Expect = 1.940e-31 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 276 DATSNWLWQIAKAHVCSND 332 DATSNW+WQ+AKAHV SND Sbjct: 558 DATSNWMWQLAKAHVGSND 576
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 9.461e-31 Identity = 50/70 (71.43%), Postives = 61/70 (87.14%), Query Frame = 2 Query: 5 ALKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 A+ EEHIIG LDGMSVQ+A++ ++LY+LD+HDI+LPFLDRINA DGRKAY TR +FFL + G LKPIAIE Sbjct: 441 AITEEHIIGHLDGMSVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKPIAIE 510 HSP 2 Score: 46.2098 bits (108), Expect = 9.461e-31 Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 3 Query: 276 DATSNWLWQIAKAHVCSND 332 DATSNWLWQ+AKAHVCSND Sbjct: 532 DATSNWLWQLAKAHVCSND 550
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 8.397e-29 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 2 Query: 5 ALKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 ++ E HI G L+G++VQQA+DE KL+++D+HD YLPFLDRINA+DGRKAYATRTIFFL G LKPIAIE Sbjct: 455 SITETHIAGHLNGLTVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRTIFFLTEAGTLKPIAIE 524 HSP 2 Score: 40.817 bits (94), Expect = 8.397e-29 Identity = 19/30 (63.33%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 243 PDQSACSTCCRDATSNWLWQIAKAHVCSND 332 P S T DATSNWLW +AKAHV SND Sbjct: 535 PRPSKVLTPPYDATSNWLWMLAKAHVSSND 564
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 4.678e-18 Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 20 HIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 HI L+G+SVQQALD N+LY+LDHHD ++PFL IN+LDG YATRT+ FL LKP+AIE Sbjct: 404 HIEKNLEGLSVQQALDSNRLYILDHHDHFMPFLIDINSLDGIFTYATRTLLFLRDDDTLKPLAIE 468 HSP 2 Score: 28.4906 bits (62), Expect = 4.678e-18 Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = 3 Query: 249 QSACSTCCRDATSNWLWQIAKAHVCSND 332 +S T +W+WQ+AKA+V ND Sbjct: 482 KSKVHTPASSGIESWVWQLAKAYVAVND 509
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.907e-18 Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 20 HIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 HI L+G++VQQALD N+LY+LDHHD ++PFL +N L+G YATRT+FFL G L P+AIE Sbjct: 407 HIGSNLEGLTVQQALDSNRLYILDHHDRFMPFLIDVNGLEGNFIYATRTLFFLRGDGTLAPLAIE 471 HSP 2 Score: 27.335 bits (59), Expect = 7.907e-18 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 291 WLWQIAKAHVCSND 332 W+WQ+AKA+V ND Sbjct: 499 WVWQLAKAYVAVND 512
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.027e-17 Identity = 34/73 (46.58%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 8 LKEEHIIGQLD--GMSVQQALDENKLYVLDHHDIYLPFLDRINAL--DGRKAYATRTIFFLNSLGPLKPIAIE 214 L EE I +++ G ++++AL+E +L+++D+HDI LPF+++IN++ D RK YA+RTIFF + G L+P+AIE Sbjct: 456 LTEEIIAREVEHYGTTIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIE 528 HSP 2 Score: 40.817 bits (94), Expect = 1.027e-17 Identity = 14/19 (73.68%), Postives = 19/19 (100.00%), Query Frame = 3 Query: 276 DATSNWLWQIAKAHVCSND 332 DAT++W+W++AKAHVCSND Sbjct: 548 DATTHWIWKLAKAHVCSND 566
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.448e-17 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 17 EHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 EHI L+G++VQQAL+ N+LY+LDHHD ++PFL +N L G YATRT+FFL G L P+AIE Sbjct: 401 EHIEKNLEGLTVQQALESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIE 466 HSP 2 Score: 26.5646 bits (57), Expect = 6.448e-17 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 279 ATSNWLWQIAKAHVCSND 332 + W+W++AKA+V ND Sbjct: 491 SVEGWVWELAKAYVAVND 508
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.728e-15 Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 8 LKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 + E HI ++G++VQ AL N+L++LDHHD ++PFLD+IN LDG YA+RTI L G LKP+AIE Sbjct: 410 ITEAHIKHNMEGLTVQNALKGNRLFILDHHDHFMPFLDKINKLDGNFIYASRTILLLKDDGTLKPLAIE 478
BLAST of FC931051 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.850e-15 Identity = 36/70 (51.43%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 5 ALKEEHIIGQLDGMSVQQALDENKLYVLDHHDIYLPFLDRINALDGRKAYATRTIFFLNSLGPLKPIAIE 214 +++ EHI ++G++VQ+AL++NKLY+LDHHD +P+L RIN+ + K YATRT+ L + G LKP+AIE Sbjct: 424 SIRTEHIESNMNGLNVQEALEQNKLYILDHHDALMPYLTRINSTN-TKTYATRTLLLLQADGTLKPLAIE 492 The following BLAST results are available for this feature:
BLAST of FC931051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931051 ID=FC931051; Name=FC931051; organism=Citrus clementina; type=EST; length=332bpback to top |