FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6703 contig Ccv1_Contig6703:337..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_ARATH (Phosphoserine aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=At4g35630 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 3.353e-72
Identity = 128/162 (79.01%), Postives = 143/162 (88.27%), Query Frame = 1
Query:   19 FNWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +NWR SGM VMEMSHRGKEF SII+KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA KEA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN  G LVADMSSNFCSKPVDV++
Sbjct:   96 YNWRGSGMSVMEMSHRGKEFLSIIQKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKAVKEAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN--GFLVADMSSNFCSKPVDVSK 255          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_SPIOL (Phosphoserine aminotransferase, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 8.000e-66
Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NWR SGM VMEMSHRGKEF SII+KAE+DLR LLNIP +Y+VLFLQGGA+TQF+A+PLNLCTP+  VDYIVTGSWGDKA KEA K+     IWSGK++ Y +IPNFD  E  QN  A+YLHICANETI+GVEFK+YP   N  G LVADMSSNFCSKPVDVT+
Sbjct:   93 NWRGSGMSVMEMSHRGKEFTSIIDKAEADLRTLLNIPSDYTVLFLQGGASTQFSAIPLNLCTPDSAVDYIVTGSWGDKAAKEAAKYAAVSSIWSGKSDNYVRIPNFDGSEFVQNSQARYLHICANETIYGVEFKKYPVPANPDGFLVADMSSNFCSKPVDVTK 255          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_STRM5 (Phosphoserine aminotransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=serC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.888e-39
Identity = 77/161 (47.83%), Postives = 107/161 (66.46%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SG  ++EMSHRG EF S+  +AE+DLR LL+IP++Y+VLFL GGATTQ A +PLN   P    DY+V+G WG  A K+A  + +  +  S +A  Y ++P     + +PDA Y+H+ ANETIHGVEF++ P   N    L+AD SS+  S+P+DV R
Sbjct:   28 DWHGSGASIVEMSHRGAEFMSVAAEAEADLRRLLDIPEDYAVLFLSGGATTQQALIPLNFAAPGQRADYVVSGHWGKTAVKQAGVYVDVNIAASSEANGYRELPARADWQLSPDAAYVHLTANETIHGVEFRDVPDTGNVP--LIADFSSSIASEPLDVRR 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_LARHH (Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) GN=serC PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 8.337e-39
Identity = 83/161 (51.55%), Postives = 106/161 (65.84%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRG+EF SI  +AE+DLR LL IP  Y VLFLQGGA +QF+ VP+NL       DY++TG WG  A KEA+ + + ++  +G+A  +  IP     + NPDA YLH  +NETI GV+F   P    S   LV DMSS+F S+PVDV+R
Sbjct:   27 DWHGSGMSVMEMSHRGREFMSIHARAEADLRELLQIPDNYRVLFLQGGAHSQFSMVPMNLLRGKTTADYVITGHWGKVAIKEARCYGDMRIAATGEASGFNGIPPQSEWQPNPDAAYLHYVSNETIGGVQF---PFIPESGVPLVCDMSSDFLSRPVDVSR 184          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_POLNA (Phosphoserine aminotransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=serC PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.422e-38
Identity = 78/160 (48.75%), Postives = 106/160 (66.25%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAK--NSTGILVADMSSNFCSKPVD 495
            +W  SGM VMEMSHRGKEF SI E AE+D R L+ IP+ + +LF+QGG   + A VPLN+ +     D++VTGSW DK+ KEA+K+C+ Q+  + ++  +T +P     +   DA Y+H+C NETIHGVEF+E P  K   S   LV D SS+  S+PVD
Sbjct:   28 DWHGSGMSVMEMSHRGKEFISIYEHAEADFRELMEIPEHFKILFMQGGGLAENAIVPLNI-SRGGLADFVVTGSWSDKSQKEARKYCDVQIAATNESSAHTSLPPPATWQLRRDASYVHVCTNETIHGVEFQELPDLKALGSDAPLVIDFSSHVASRPVD 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_POLSJ (Phosphoserine aminotransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=serC PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.857e-38
Identity = 80/163 (49.08%), Postives = 106/163 (65.03%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAK--NSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI E AE+D R L+ IP  + +LF+QGG   + A VPLNL +     D++VTGSW DK+ KEA+K+C+ Q+  +     +T++P   +     DA Y+H+C NETIHGVEF+E P  K   S   LV D SS+  S+PVD +R
Sbjct:   28 DWHGSGMSVMEMSHRGKEFISIYENAEADFRELMAIPPNFKILFMQGGGLAENAIVPLNL-SRGASADFVVTGSWSDKSQKEARKYCDVQIAATNAGSDHTQLPPPASWNLRRDASYVHVCTNETIHGVEFQELPDIKTLGSDAPLVIDFSSHVASRPVDWSR 189          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_STRMK (Phosphoserine aminotransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=serC PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.404e-38
Identity = 77/161 (47.83%), Postives = 105/161 (65.22%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SG  ++EMSHRG EF S+  +AE+DLR LL+IP +Y+VLFL GGATTQ A +PLN   P    DY+V+G WG  A K+A  + +  +  S +A  Y ++P     + + DA Y+HI ANETIHGVEF++ P   N    L+AD SS+  S+P+DV R
Sbjct:   28 DWHGSGASIVEMSHRGAEFMSVAAEAEADLRRLLDIPDDYAVLFLSGGATTQQALIPLNFAAPGQRADYVVSGHWGKTAVKQAGVYVDVNIAASSEANGYRELPARADWQLSRDAAYVHITANETIHGVEFRDVPDTGNVP--LIADFSSSIASEPLDVRR 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_AZOSE (Phosphoserine aminotransferase OS=Azoarcus sp. (strain EbN1) GN=serC PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.058e-38
Identity = 81/166 (48.80%), Postives = 109/166 (65.66%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNP-----QVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W+ +G GVMEMSHRGKEF SI+ +AE+DLR LL IP  Y VLFLQGGAT QFA +P+NL       DY+VTGSW  KA+ EA+          ++  S +   +T++   + L+ +P A+YLH+C NETIHGVE  E     ++   LVADMSS+  S+P+D+ R
Sbjct:   28 DWQGAGCGVMEMSHRGKEFTSIVAQAEADLRELLAIPDNYRVLFLQGGATQQFAQIPMNLLA-GGSADYLVTGSWSKKAYGEAKHLAGALGGAVRLAGSTETAGFTRLLRTEELDLDPRARYLHLCTNETIHGVELCEVSRLPDTGVPLVADMSSHILSRPLDIGR 192          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_NITEU (Phosphoserine aminotransferase OS=Nitrosomonas europaea GN=serC PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.572e-37
Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYP-----SAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI ++ ES LR L  IP  Y VLFLQGGA++QFA VP+NL       DY+ TG W  KA  EA+ + + Q+  S +++ +  +P       +PDA Y+H  +NETI GVEF+  P     +  N    LVADMSSNF S+P DV++
Sbjct:   28 DWHGSGMSVMEMSHRGKEFMSIADETESALRELAGIPDHYKVLFLQGGASSQFAMVPMNLLGKKGKADYVNTGQWSAKAISEAKNYGSVQIAASSESDGFNSVPPLAQWHISPDAAYVHYASNETIGGVEFQWTPDLSAVAGDNKNIPLVADMSSNFLSRPFDVSK 193          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BURM1 (Phosphoserine aminotransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=serC PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.503e-37
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK-YTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGKEF SI E A +DLR LL++P  + VLFLQGG   + A VP+NL       D++VTGSW  K+F EA+K+C P +  +GK +  +T+ P F   + + D  Y+H+C NETI GVE  E P   +    LVAD+SS+  S+P+DV +
Sbjct:   27 DWHGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPASHRVLFLQGGGIAENAIVPMNLLGSRKTADFVVTGSWSQKSFNEAKKYCTPHLAATGKTDAGFTRAPAFAEWQLSDDPAYVHLCTNETIDGVETFEIPDLGDVP--LVADVSSHILSRPMDVAK 186          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ARATH3.353e-7279.01Phosphoserine aminotransferase, chloroplastic OS=A... [more]
SERC_SPIOL8.000e-6673.01Phosphoserine aminotransferase, chloroplastic OS=S... [more]
SERC_STRM54.888e-3947.83Phosphoserine aminotransferase OS=Stenotrophomonas... [more]
SERC_LARHH8.337e-3951.55Phosphoserine aminotransferase OS=Laribacter hongk... [more]
SERC_POLNA1.422e-3848.75Phosphoserine aminotransferase OS=Polaromonas naph... [more]
SERC_POLSJ1.857e-3849.08Phosphoserine aminotransferase OS=Polaromonas sp. ... [more]
SERC_STRMK5.404e-3847.83Phosphoserine aminotransferase OS=Stenotrophomonas... [more]
SERC_AZOSE7.058e-3848.80Phosphoserine aminotransferase OS=Azoarcus sp. (st... [more]
SERC_NITEU1.572e-3748.19Phosphoserine aminotransferase OS=Nitrosomonas eur... [more]
SERC_BURM13.503e-3748.15Phosphoserine aminotransferase OS=Burkholderia mul... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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