FC931185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_TOBAC (Uroporphyrinogen decarboxylase, chloroplastic OS=Nicotiana tabacum GN=DCUP PE=1 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 8.504e-84 Identity = 152/202 (75.25%), Postives = 174/202 (86.14%), Query Frame = 1 Query: 25 SSISAISNFPLYXXXXXXXXXRYVRCAVGGTVAEPKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSK 630 SSIS S R + C+ GGTVAEPK ++ +P+LL AVRG++VERPPVWLMRQAGRYMKSYQ++CEKYP FR+RSENVDLVVEISLQPW VF+PDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDP+ T A+V++VREF PE+SVPYVG+ALTILR+EVNN+AAVLGFVGAPFTLASYVVEGGSSK+F+K Sbjct: 9 SSISPSSKSAFTSPSNFNLNPRLICCSAGGTVAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTK 210
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP2_ORYSJ (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0337600 PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.650e-77 Identity = 145/181 (80.11%), Postives = 160/181 (88.40%), Query Frame = 1 Query: 94 VRC-AVGGTVAEPKNVSVAE-PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSK 630 VRC AVG +AE V AE P+L+ A++G VERPPVWLMRQAGRYMKSYQ++CE++PSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVIFDP+ T A V++VREF PEE VPYVG+AL ILREEVNNEAAVLGFVGAPFTLASY VEGGSSK+FSK Sbjct: 29 VRCSAVGEVMAETAAVGTAEEPLLVSAIKGRKVERPPVWLMRQAGRYMKSYQLLCERHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSK 209
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP2_ARATH (Uroporphyrinogen decarboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=At2g40490 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 4.520e-77 Identity = 141/182 (77.47%), Postives = 161/182 (88.46%), Query Frame = 1 Query: 88 RYVRCAVGGTVAEPKNVSV-AEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSK 630 R VRC+V GT + VS +EP+LL+AV+GE V+RPPVWLMRQAGRYMKSYQ +CEKYPSFR+RSEN DLVVEISLQPW VFKPDGVILFSDILTPLSGMNIPFDI+KGKGP+IF+P + A+V QVREF PEESVPYVG+AL LR EVNNEAAVLGFVGAPFTL+SYV+EGGSSK+F++ Sbjct: 32 RIVRCSVEGTTVTERKVSATSEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQ 213
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_MAIZE (Uroporphyrinogen decarboxylase, chloroplastic OS=Zea mays GN=LES22 PE=2 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 3.137e-70 Identity = 127/150 (84.67%), Postives = 140/150 (93.33%), Query Frame = 1 Query: 178 EDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 E+VERPPVWLMRQAGRYMKSYQ++CE+YPSFRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL ILR+EV NEAAVLGFVGAPFTLASY VEGGSSK+F+ Sbjct: 62 EEVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFT 211
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_HORVU (Uroporphyrinogen decarboxylase (Fragment) OS=Hordeum vulgare GN=DCUP PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.009e-68 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 1 Query: 184 VERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSK 630 VERPPVWLMRQAGRYMKSYQ +CEKYP FRERSENVDLVVEISLQPW VFKPDGVILFSDILTPL GMNIPFDI+KGKGPVI+DP+ T A V++VREF PEE VPYVG+AL +LR EV NEAAVLGFVGAPFTLASY VEGGSSK+FSK Sbjct: 1 VERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSK 149
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_SYNP2 (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemE PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.237e-58 Identity = 106/159 (66.67%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 151 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 P+LL+A RGE VER PVW+MRQAGRYMK Y+ + EKYPSFRERSEN DL +EISLQPWH F+PDGVI+FSDILTPL GM IPFDII+ KGP+I +PI T A+VD + FDP ES+P++ L LR+EV N + VLGFVGAP+TLA+Y +EG SSK+++ Sbjct: 8 PLLLRAARGEKVERTPVWMMRQAGRYMKIYRDLREKYPSFRERSENPDLAIEISLQPWHAFQPDGVIMFSDILTPLPGMGIPFDIIESKGPIIENPIRTQAQVDAMTPFDPAESLPFIKTILGTLRQEVGNASTVLGFVGAPWTLAAYAIEGKSSKNYA 166
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_SYNSC (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain CC9605) GN=hemE PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.109e-58 Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 1 Query: 151 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP+H FKPDGVILFSDILTPL GM I FDII+ KGP I DPI + A+VD +R +P ES+P+VG+ L LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ Sbjct: 6 PLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPSESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYA 164
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPX (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH8102) GN=hemE PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.046e-57 Identity = 109/159 (68.55%), Postives = 131/159 (82.39%), Query Frame = 1 Query: 151 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP+H FKPDGVILFSDILTPL GM I FDII+ KGP I DPI + +V+ +R +P ES+P+VG+ L LRE V NEAAVLGFVGAP+TLA+YVVEG SSK+++ Sbjct: 6 PLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVNALRPLNPSESMPFVGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYA 164
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_SYNPW (Uroporphyrinogen decarboxylase OS=Synechococcus sp. (strain WH7803) GN=hemE PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.978e-57 Identity = 109/159 (68.55%), Postives = 131/159 (82.39%), Query Frame = 1 Query: 151 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 P+LL+A RGE VERPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL EIS+QP++ FKPDGVILFSDILTPL GM I FDII+ KGP I DPI T A+VD + +P ES+P+VG+ L LR+ V NEAAVLGFVGAP+TLA+YVVEG SSK+++ Sbjct: 6 PLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISMQPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRTMAQVDALHPLNPAESMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYA 164
BLAST of FC931185 vs. ExPASy Swiss-Prot
Match: DCUP_CYAA5 (Uroporphyrinogen decarboxylase OS=Cyanothece sp. (strain ATCC 51142) GN=hemE PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.785e-57 Identity = 102/159 (64.15%), Postives = 129/159 (81.13%), Query Frame = 1 Query: 151 PMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFS 627 P LL+A RGE ++RPPVW+MRQAGRYMK Y+ + +KYPSFRERSEN DL +EISLQPW F+PDGVI+FSDILTPL GM IPFDI++ KGPVI PI T +VD +R DPEES+P++ L LR+EV N++ VLGFVG+P+TLA+Y +EG SSK+++ Sbjct: 8 PYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTILQSLRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYA 166 The following BLAST results are available for this feature:
BLAST of FC931185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931185 ID=FC931185; Name=FC931185; organism=Citrus clementina; type=EST; length=649bpback to top |