FC931194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: A1CF_MOUSE (APOBEC1 complementation factor OS=Mus musculus GN=A1cf PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 446 PPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELK 661 P G E+FIG LP+D E++L LCE IG ++E+RLM D +G ++G+AFV+F +K+ AK AI +L++ E++ Sbjct: 52 PERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIR 122
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: A1CF_RAT (APOBEC1 complementation factor OS=Rattus norvegicus GN=A1cf PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 33/72 (45.83%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 446 PPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELK 661 P G E+FIG LP+D E++L LCE IG ++E+R+M D +G ++G+AFV+F +K+ AK AI +L++ E++ Sbjct: 52 PERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNAIKQLNNYEIR 122
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: A1CF_HUMAN (APOBEC1 complementation factor OS=Homo sapiens GN=A1CF PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 440 ALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELK 661 A P G E+FIG LP+D E++L LCE IG ++E+R+M D +G ++G+AFV+F +K AK AI +L++ E++ Sbjct: 50 APPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNAIKQLNNYEIR 122
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: A1CF_PONAB (APOBEC1 complementation factor OS=Pongo abelii GN=A1CF PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11 Identity = 34/74 (45.95%), Postives = 53/74 (71.62%), Query Frame = 2 Query: 440 ALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELK 661 A P G E+FIG LP+D E++L LCE IG ++E+R+M D +G ++G+AFV+F +K AK AI +L++ E++ Sbjct: 50 APPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNAIKQLNNYEIR 122
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 413 EKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 +KD+ ++ + N + V++ + +D +EE+ RDL E G++ L +D ESG+S+GF FV+F S + A A++ L+ K+ KG+ Sbjct: 221 KKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQ 305
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 407 EDEKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 + K++ A+L A + V+I +D +E L+DL G V++M D ESG+SKGF FVSF E A+KA+DE++ KEL GK Sbjct: 174 KSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 407 EDEKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 + K++ A+L A + V+I +D +E L+DL G V++M D ESG+SKGF FVSF E A+KA+DE++ KEL GK Sbjct: 174 KSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 407 EDEKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 + K++ A+L A + V+I +D +E L+DL G V++M D ESG+SKGF FVSF E A+KA+DE++ KEL GK Sbjct: 174 KSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 407 EDEKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 + K++ A+L A V+I +D +E L+DL G V++M D ESG+SKGF FVSF E A+KA+DE++ KEL GK Sbjct: 174 KSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
BLAST of FC931194 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 407 EDEKDKHAQLLALPPNGSEVFIGGLPKDASEEDLRDLCEPIGDVFEVRLMKDKESGESKGFAFVSFRSKEFAKKAIDELHSKELKGK 667 + +K++ A+L A + V+I +D +E L++L G V++M D ESG+SKGF FVSF E A+KA+DE++ KEL GK Sbjct: 174 KSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259 The following BLAST results are available for this feature:
BLAST of FC931194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931194 ID=FC931194; Name=FC931194; organism=Citrus clementina; type=EST; length=686bpback to top |