FC931200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1 PE=1 SV=2) HSP 1 Score: 417.927 bits (1073), Expect = 2.664e-116 Identity = 202/240 (84.17%), Postives = 223/240 (92.92%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 ENEL++YRTNLIKESIRMGYNDFGDFYYA G LGDAFK+Y+RTRDYCTT+KHIIHMCM+AILVSIEMGQFTHVTSYV+KAEQ PE LEP+ AKLRCA+GLAHLE +KYKLAARKFL+V P+LGNSYNEVIA QD+ATYGGLCALASFDR+ELK KVIDN+NFRNFLELVP+VRELINDFYSSRYASCL+YL +LK+NLLLDIHLHDHV+TLYDQIR ALIQYT PFVSVDL M +AF Sbjct: 123 ENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNYIRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAF 362
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_DICDI (COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum GN=csn1 PE=1 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.083e-72 Identity = 129/240 (53.75%), Postives = 181/240 (75.42%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 E +LN ++N++K+SIR ND G+FYY G +A K ++RTRDYCTTSKH++ MC + I + ++ +TH SY++KAEQ+P+ L+ V+ AKLR GL +L+ +YKLAARKF+E + N ++++I+ QD+A YGGLCALA+FDR ELK KVID+ F+N+LELVPE+RELINDFY+++Y SCL YL +K LLLDIHL+ HVE LY +IR+ AL+QY P+ SVD+++M +AF Sbjct: 112 EQDLNTAKSNMVKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKAEQSPD-LDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQDIAYYGGLCALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAF 350
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_RAT (COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.366e-64 Identity = 130/249 (52.21%), Postives = 169/249 (67.87%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 + +L Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV TLY QIRN ALIQY P+VS D+H M AF Sbjct: 126 DTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAF 373
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_MOUSE (COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.366e-64 Identity = 130/249 (52.21%), Postives = 169/249 (67.87%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 + +L Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV TLY QIRN ALIQY P+VS D+H M AF Sbjct: 126 DTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAF 373
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_XENLA (COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.272e-64 Identity = 129/249 (51.81%), Postives = 169/249 (67.87%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 + +L Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ FL D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV TLY QIRN ALIQY P+VS D++ M AF Sbjct: 142 DTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAVLTKLKCAAGLAELAARKYKQAAKCFLLASFDHCD-FPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATAF 389
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_HUMAN (COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4) HSP 1 Score: 242.662 bits (618), Expect = 1.534e-63 Identity = 129/249 (51.81%), Postives = 168/249 (67.47%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEP---------VTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 + +L Y+ N IKESIR G++D GD Y G L +A K Y R RDYCT++KH+I+MC++ I VS+ + ++HV SYVSKAE TPE E + KL+CAAGLA L ARKYK AA+ L D + + E+++ +VA YGGLCALA+FDR EL+ VI + +F+ FLEL P+VR++I FY S+YASCL L +K NLLLD++L HV TLY QIRN ALIQY P+VS D+H M AF Sbjct: 146 DTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD-FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAF 393
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_DROME (COP9 signalosome complex subunit 1b OS=Drosophila melanogaster GN=CSN1b PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.875e-61 Identity = 121/246 (49.19%), Postives = 169/246 (68.70%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIA------KLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 +++L Y++N IKESIR G++D D Y + G L +A K Y R RDYCT+ KH+++MC++ I VSI + + HV SY+SKAE TP+ E A +L CAAGLA L+ +KYK+AA+ FL D + + E+I+ +VA YGGLCALA+FDR ELK VI + +F+ FLEL P++R++I FY S+YASCL L ++ NLL+D+++ HV TLY +IRN ALIQY P++S D+H M AF Sbjct: 178 DSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQKKYKVAAKHFLNANFDHCD-FPEMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAF 422
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_EMENI (COP9 signalosome complex subunit 1 OS=Emericella nidulans GN=csnA PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 6.046e-52 Identity = 111/243 (45.68%), Postives = 148/243 (60.91%), Query Frame = 1 Query: 1 ENELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQT---PEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 E+EL Y+ NLIKESIRMG + G Y+ G L AFK+Y R RD+CTT HI M I V+IE G + +V S V + PE + K+ A GL+ L + Y AA F+ P LG+++NEV+ + DVA YGGLCALAS DR EL+ +V+DN +FRNFLEL P +R I+ F +S++ CL+ L +A+ LLDIHL HV+ LY++IR ++ QY PF V L M F Sbjct: 140 EHELRGYKNNLIKESIRMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRSQGGKPEE-QAKHQPKISAAMGLSQLHSGSYLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCALASMDRNELQRRVLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLEILEAYRADYLLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIF 381
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_NEUCR (COP9 signalosome complex subunit 1 OS=Neurospora crassa GN=csn-1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36 Identity = 91/246 (36.99%), Postives = 141/246 (57.32%), Query Frame = 1 Query: 7 ELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYV----SKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLE----VGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPFVSVDLHMMXNAF 720 EL Y+ NLIKESIRMG D G + A G + A S+ + R ++++ ++ + + V+IE + + +++ S + P+A T +K+ A G+A L +YK AA F+E V P++ YN++ + DVA YGGL ALA+ DR EL++ ++DN +FR FL+ P +R I F + RYA+C++ L + + + LLDI+L HV LY IR +++QY PF V L M AF Sbjct: 101 ELQGYKNNLIKESIRMGNEDLGKHFEAIGDVEAAMDSFWKMRTEVSSTEQLVDLGKLLVRVAIERRDWKSIGNHLKPLNSVNDSDPKAKALKTYSKI--ANGIAALGQERYKEAAFCFVEASSGVPPEI---YNQIASPNDVAIYGGLLALATMDRHELQANLLDNDSFREFLQREPHIRRAITQFVNGRYAACIEILESYRPDYLLDIYLQKHVPKLYADIRTKSIVQYLKPFSCVRLDTMQKAF 341
BLAST of FC931200 vs. ExPASy Swiss-Prot
Match: CSN1_SCHPO (COP9 signalosome complex subunit 1 OS=Schizosaccharomyces pombe GN=csn1 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26 Identity = 74/243 (30.45%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 7 ELNAYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKSYVRTRDYCTTSKHIIHMCMSAILVSIEMGQFTHVTSYVSKAEQTPEALEPVTIAKLRCAAGLAHLEARKYKLAARKFLEVGPDLGNSYNEVIAAQDVATYGGLCALASFDRAELKSKVIDNVNFRNFLELVPEVRELINDFYSSRYASCLDYLGNLKANLLLDIHLHDHVETLYDQIRNIALIQYTHPF-------VSVDLHMMXN 714 EL AY+ NLI+ESIR D F+ G A +SY + R+YCT + I H+ + + +SI +G ++HV ++ S+A+ T A +T + + GLA+ Y+ A FL+V D + +I D++ Y LCALA +D L ++ N F +L P +R + + +Y+ LD L + LD++L + L+ IR +L+ Y P+ ++VD H+ N Sbjct: 98 ELKAYKNNLIRESIRAAQLDLASFFADVGQFDSALRSYAKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAAMELT-SPIYAYCGLANFCLGDYEEALAHFLKVETDTSDG---IITKTDISVYISLCALACWDHKRLIQELERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLIRERSLLDYLIPYSALPFSKIAVDFHIDEN 336 The following BLAST results are available for this feature:
BLAST of FC931200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931200 ID=FC931200; Name=FC931200; organism=Citrus clementina; type=EST; length=721bpback to top |