FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:14..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.773e-89
Identity = 161/212 (75.94%), Postives = 180/212 (84.91%), Query Frame = 3
Query:   39 MATTFFRRLAKATPIAFNEAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            MAT+FFRRLA++ PI F  AFG Q KS    FRF  GAIAA++GG SYY   S  NLV+LDQ  EETGPK ALNPDKW+ FKLQDTARVSHN+ LFRFSFDPSA+LGL VASC+LTRAPLG +AEG TKYV+RPYTPISD EAKG+FDLLIKVYP+GKMSQHFASLKPGDV+EVKGP+EK +YSPNMKKHIGMIAG    TPMLQVI+AI+K
Sbjct:    1 MATSFFRRLARSAPITFPVAFGSQSKSGSGAFRFSTGAIAALSGGFSYYYLTSGNNLVYLDQAKEETGPKTALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSAELGLHVASCLLTRAPLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVK 212          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28
Identity = 77/175 (44.00%), Postives = 105/175 (60.00%), Query Frame = 3
Query:  159 AVAGGVSYYCYFSSPNLVHLDQINEETGPKI--ALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            A+A GV Y    +S +         E G ++  AL+P ++  F+L++   V+HN+ +FRF+  +    LGL +   I  RA +G       K V RPYTPIS  E +G+FDLLIKVY +G MS +  ++  GD +EVKGP  K  Y PNM+K IGM+AG    TPMLQVI+AILK
Sbjct:   15 ALAAGVKYVFTLTSGSNKDKKGGEAEKGKQVEKALDPQEYRKFQLKEKFIVNHNTRIFRFALPNEDDILGLPIGQHISLRAVVGG------KEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILK 183          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.698e-28
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S+H  +LK GDV++V+GP   + Y+PNM +HIGMIAG    TPMLQVI+AI++ +  + G
Sbjct:   57 LNPTEFQEFVLKEKTDISHNVSIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAIIRNRPRNGG 200          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  237 TGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            +G K  L P+++  F+L++   +SHN+ ++RF        LGL +   I     LG   EG  K VVR YTPIS  E KGHFDLLIK YP G +S++ A+LK G+ + VKGP   + Y+PNM +H GMI+G    TPMLQV++AI++
Sbjct:   27 SGSKKVLKPNEFQEFELEEKTVLSHNTAIYRFKLPRKTDILGLPIGQHI----SLGATIEGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKYVANLKVGEKMRVKGPKGAMVYTPNMVRHFGMISGGTGITPMLQVVKAIIR 169          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.047e-27
Identity = 67/152 (44.08%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            P+  LNP ++  F L+D   VSHN  ++RF+   P+  LGL +   I   A +     G +K +VR YTPIS  +  G+FDLL+K YP+G +S+H  +L+ GD ++V+GP   + Y+PNM +HIGMIAG    TPMLQVI+AI+K +  + G
Sbjct:   52 PRKVLNPTEFQNFVLKDKTIVSHNVCIYRFALPRPTDILGLPIGQHISLAATI----PGQSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGG 199          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            P+  LNP+++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAG    TPMLQ+I+AI++ +  + G
Sbjct:   57 PRKVLNPNEFQNFVLKEKNDISHNVTIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 204          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAG    TPMLQ+I+AI++ +  + G
Sbjct:   40 PRKVLNPSEFQNFVLKEKTDISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 187          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAG    TPMLQ+I+AI++ +  + G
Sbjct:   36 PRKVLNPTEFQNFVLKEKNEISHNVAIYRFALPRPTDILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGG 183          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.195e-27
Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            PK  L P  +  F+L++   +SHN  ++RF    P + LGL +   I   A + Q  +G+TK +VR YTPIS     G+FDLLIK YP G +S+H ASL+ G  + VKGP     Y+PNM +H GM+AG    TPMLQVI AI++
Sbjct:   54 PKKVLKPAVFQEFELKEKTIISHNVAIYRFKLPTPDSVLGLPIGQHISIGAAIEQP-DGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVIRAIVR 197          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.195e-27
Identity = 64/152 (42.11%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSG 695
            P+  LNP ++  F L++   +SHN  ++RF+   P+  LGL +   I   A +    EG  K VVR YTPIS     G+FDLL+K YP+G +S++  +LK GD ++V+GP   + Y+PNM +HIGMIAG    TPMLQ+I+A+++ +  + G
Sbjct:   53 PRKVLNPTEFQEFVLKEKTDISHNVCIYRFALPRPADILGLPIGQHISLAATI----EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGG 200          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
NCB5R_ARATH4.773e-8975.94NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]
NCB5R_DICDI4.698e-2844.00NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_ASPCL4.698e-2845.27NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_PHANO1.047e-2745.58NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
NCB5R_COCIM1.047e-2744.08NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_EMENI1.367e-2742.76NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_ASPTN1.367e-2742.76NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_ASPOR3.977e-2742.76NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_NEUCR5.195e-2745.52NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
NCB5R_NEOFI5.195e-2742.11NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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