FC931380

Overview
NameFC931380
Unique NameFC931380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length567
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15320 contig Ccv1_Contig15320:1..567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.582e-74
Identity = 137/147 (93.20%), Postives = 142/147 (96.60%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDA+VQSD KLWPFKVI G GDKPMIVV YKGEEKQF+AEEISSMVLIKM+EIAEA+LG+TVKNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 6.111e-74
Identity = 136/147 (92.52%), Postives = 141/147 (95.92%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSD +VQSD KLWPFKVI G GDKPMIVVTYKGEEKQFAAEEISSMVL KM+EIAEAYLG+T+KNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.322e-73
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVA+NPINTVFDAKRLIGRRFSDA+VQ D KLWPFKVI G GDKPMIVVTYKGEEK+FAAEEISSMVL KM+EIAEA+LGSTVKNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAKRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 5.173e-73
Identity = 134/147 (91.16%), Postives = 142/147 (96.60%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP+NTVFDAKRLIGRRFSDA+VQSD +LWPF +I+G  +KPMIVV YKGEEKQFAAEEISSMVLIKMREIAEA+LG+TVKNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 1.966e-72
Identity = 133/147 (90.48%), Postives = 140/147 (95.24%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP+NTVFDAKRLIGRRFSD++VQSD KLWPFK+ AG  DKPMI V YKGEEK+FAAEEISSMVLIKMREIAEAYLG T+KNAV
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 4.842e-71
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRF+D++VQSD KLWPF + +G  +KPMIVV YKGE+K+F+AEEISSM+LIKMREIAEAYLG+T+KNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 6.992e-70
Identity = 133/147 (90.48%), Postives = 139/147 (94.56%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MAGKGEGPAIGIDLGTTYS VGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDA+VQ+D K  PFKV++G G+KPMI V YKGEEKQFAAEEISSMVL KM+EIAEAYLGSTVKNAV
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVKNAV 147          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 9.449e-67
Identity = 127/144 (88.19%), Postives = 132/144 (91.67%), Query Frame = 1
Query:  136 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFS   VQS  KLWP + + G GDKPMIV  YKGEEKQFAAEEISSMVLIKM+EIAEAYLGST+KNAV
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIKNAV 145          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.778e-64
Identity = 120/142 (84.51%), Postives = 130/142 (91.55%), Query Frame = 1
Query:  142 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            EG AIGIDLGTTYSCVGVWQ+DRVEII NDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD++VQ+D KLWPFKV     DKPMIVV YKGEEK+F+AEEISSMVL+KMRE+AEA+LG  VKNAV
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAV 146          
BLAST of FC931380 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.944e-60
Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 1
Query:  127 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDTKLWPFKVIAGAGDKPMIVVTYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAV 567
            MA KG G AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSY AFTD+ RLIGDA KNQVAMNP NTVFDAKRLIGRRF+  +VQSD KLWP +VI G G+KPMIVV YKGE KQFAAEEISSMVLIKM EIAEA+LG +V +AV
Sbjct:    1 MASKG-GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYFAFTDTSRLIGDA-KNQVAMNPSNTVFDAKRLIGRRFNHPSVQSDMKLWPLQVIPGPGEKPMIVVNYKGESKQFAAEEISSMVLIKMLEIAEAFLGHSVNDAV 145          
The following BLAST results are available for this feature:
BLAST of FC931380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC3.582e-7493.20Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY6.111e-7492.52Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_SOLLC2.322e-7391.84Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP72_ARATH5.173e-7391.16Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_ARATH1.966e-7290.48Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP73_ARATH4.842e-7187.76Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL6.992e-7090.48Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE9.449e-6788.19Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN9.778e-6484.51Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA2.944e-6081.63Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionC34104E05EF PostHarvP1 Citrus clementina cDNA clone C34104E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931380 ID=FC931380; Name=FC931380; organism=Citrus clementina; type=EST; length=567bp
GACTTGAAACCCTAGCTCTCTGTAGTTTTCTGTTTTCTAGATTTGCTTTT
TTTGTTTTTTTGTTTTTTTGTTTTCGCCCTCCTTTGAATTCTTCTTCGTC
GACATAACAAAGAGAAAGCTGTAGGCATGGCTGGTAAAGGAGAAGGTCCA
GCAATCGGCATTGACTTGGGCACGACTTACTCGTGCGTTGGTGTGTGGCA
ACACGACCGTGTCGAGATCATCGCTAATGATCAAGGTAACAGAACGACAC
CGTCTTACGTTGCCTTTACCGATTCTGAGCGTTTGATTGGTGATGCCGCT
AAGAACCAGGTCGCCATGAATCCTATCAATACCGTCTTTGATGCAAAGAG
GTTGATTGGTCGTAGATTCAGTGACGCAACTGTCCAGAGTGACACTAAGT
TGTGGCCATTCAAGGTTATAGCTGGTGCTGGTGATAAGCCTATGATTGTG
GTCACATACAAGGGTGAAGAGAAACAATTCGCTGCAGAAGAGATCTCTTC
CATGGTTCTCATTAAGATGCGTGAAATTGCTGAGGCCTACCTGGGATCTA
CAGTCAAGAATGCAGTG
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