FC931403

Overview
NameFC931403
Unique NameFC931403
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.968e-40
Identity = 82/193 (42.49%), Postives = 122/193 (63.21%), Query Frame = 3
Query:  105 SMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGA-CPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQF-NPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            +MPF+I NE FEK+ + G   N+++YL   +       T ++ ++S  +NF  LLGAFLSD+Y GR+ T+  AS++SFLGM++L LTA + ++ P  C    +G+ C   T  QLA L++   L+ IG+GGIRPC+LAFGADQ  N      ++ + SFF WYY +   A++I+ T IVY+Q  + W  G G+
Sbjct:   27 TMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLGWKIGFGV 219          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38
Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = 3
Query:   99 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            WK+ PF++GNE  E+L   G + NL+ YLTT  +  +++A T +  + GT     L+GA L+D Y+GRY T+   S   F+GM  L+L+A++  L P +C       CP  TP Q A  F GL L+ +G GGI+PC  +FGADQF+      +    SFFNW+YF+     ++S +++V++Q +  W  G GI
Sbjct:   45 WKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAEC---IGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRGWGLGFGI 234          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 76/193 (39.38%), Postives = 116/193 (60.10%), Query Frame = 3
Query:   99 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            WK+  F++G E  E+L   G S+NL+ YL    NM++++A+  ++ +SGT     L+GAF++D Y GRY T+    V    GM +L+++A++  L  P C  +   A  G T    A  F  L L+ +G GGI+PC  +FGADQF+   E  K+  +SFFNW+YF      MI+ +V+V++Q +V W WGLG+
Sbjct:   29 WKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGL-TPTCSGETCHATAGQT----AITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVGWGWGLGV 216          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36
Identity = 81/221 (36.65%), Postives = 120/221 (54.30%), Query Frame = 3
Query:   15 HSSPDTKEKNSKTAVVATDDEPQLNYRGWKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            H +P  KEK                   WK+  F++GNE  E+L   G  +NL+ YL +  N  + TA   +  +SGT     L+GAF++D Y GRY T+         GM +L+L+A++  L P   GN ++  C  P   Q A  F  L ++ +G GGI+PC  +FGADQF+ N E+ K   +SFFNW+YF+     +I+ TV+V++Q +V W WG G+
Sbjct:   16 HKNPANKEKTGN----------------WKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKP---GNCNADTCH-PNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVGWGWGFGV 216          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32
Identity = 72/202 (35.64%), Postives = 112/202 (55.45%), Query Frame = 3
Query:   99 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGILHL*CSYPV 704
            WK+  FV+  E FE++   G SSNL++Y+TT  +  ++ ++  +  + GT+    +LGA+++D +FGRY T   +S    LGM +L+L+ ++  L PP C   +   C   +  QLA  F  L  + IG GG +P     GADQF+      K    SFFNW+ F+  F    + TV+VYVQ +V WA G G+  L  ++ +
Sbjct:   31 WKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVGWAIGYGLSTLGLAFSI 232          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31
Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 3
Query:   99 WKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            WK+  FV+  E FE++   G SSNL +Y+TT  +  ++ ++  +  + GT+    +LGA++ D   GRY T   +    F GM+VL+L+  I  + PP+C   +   C   +  QLA  F  L  + IG GG +P     GADQF+      K    SFFNW+ F+  F  + + TV+VYVQ +V W  G G+
Sbjct:   31 WKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVGWTLGYGL 223          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.743e-31
Identity = 68/194 (35.05%), Postives = 102/194 (52.58%), Query Frame = 3
Query:   96 GWKSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            GW S   ++  E  E+L T G   NL+ YLT   ++ + TA   +  F GT+    LLG F++DT+ GRY T+   +     G+ +L+L+  I  L PP C    S  C   +  QL  L+  L L  +G GG++     FG+DQF+      +  +T FFN ++F      ++++TV+VYVQ DV   WG GI
Sbjct:   30 GWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVGRKWGYGI 223          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: PEPT1_DROME (Peptide transporter family 1 OS=Drosophila melanogaster GN=yin PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 60/184 (32.61%), Postives = 90/184 (48.91%), Query Frame = 3
Query:  102 KSMPFVIGNETFEKLGTTGTSSNLLVYLTTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSGACPGPTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDV 653
            KS+ F+I NE  E+    G  + L++YLT        TAT L + F+       L+GA ++D + G+YKT+ + S+   LG +V+S                  GA P       A    GL L+ IG GGI+PC  AFG DQF+   +S +  +  FF+ +YF      +IS T    +++DV
Sbjct:   34 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALIADGWLGKYKTILYLSLVYSLGAMVVSF-----------------GAVPLSGMPTKAVTVVGLLLIAIGTGGIKPCVSAFGGDQFSLPAQSFQ--LAKFFSLFYFAINAGSLISTTFTPILRADV 198          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: S15A3_HUMAN (Solute carrier family 15 member 3 OS=Homo sapiens GN=SLC15A3 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = 3
Query:  129 ETFEKLGTTGTSSNLLVYL-TTIFNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQDSG----ACPG-------PTPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGI 677
            E  E+    G ++NL++YL +T FN     AT    +F G +     +G +L+D Y GRY+ +   S+  +L    L    A        CG   +     ACP        P+P+    L+ GL L+ + A  +R    +FGADQ     + G+     FFNW+Y++     ++SL V+ ++Q ++S+  G  I
Sbjct:   42 EMLERAAFFGVTANLVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVAL-SLLLYLAASGLLPATAFPDGRSSFCGEMPASPLGPACPSAGCPRSSPSPYCAPVLYAGLLLLGLAASSVRSNLTSFGADQV---MDLGRDATRRFFNWFYWSINLGAVLSLLVVAFIQQNISFLLGYSI 232          
BLAST of FC931403 vs. ExPASy Swiss-Prot
Match: S15A3_MOUSE (Solute carrier family 15 member 3 OS=Mus musculus GN=Slc15a3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.815e-16
Identity = 53/196 (27.04%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  129 ETFEKLGTTGTSSNLLVYLTTI-FNMKSITATTLINIFSGTTNFATLLGAFLSDTYFGRYKTLGFASVASFLGMLVLSLTAAISKLHPPDCGNQD---------SGACPGP--TPWQLAFLFTGLGLMVIGAGGIRPCNLAFGADQFNPNTESGKQGITSFFNWYYFTFTFAMMISLTVIVYVQSDVSWAWGLGIL 680
            +  E+    G +SNL++YL ++ FN     A+    +F G +     +G +L+D Y GR+ T+   S+  +L    L LT   +      CG            S +C G   +P+    L+  L L+ + A  +R    +FGADQ     + G+     FFNW+Y++     ++SL V+ +++ ++S+ WG  I+
Sbjct:   42 QMLERAAFFGVTSNLVLYLNSLNFNWDGQQASRATLLFLGASYLLAPVGGWLADVYLGRFLTISL-SLLLYLAASGLLLTTITNDGRRSFCGEMPELPLEPACPSSSCQGSWSSPYCATTLYLVLLLLALAASSVRSTLTSFGADQV---MDLGRDATRRFFNWFYWSINLGAILSLLVVAFIEQNISFLWGYSII 233          
The following BLAST results are available for this feature:
BLAST of FC931403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PTR2X_ARATH3.968e-4042.49Probable peptide transporter At1g52190 OS=Arabidop... [more]
PTR2_ARATH2.177e-3839.38Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH9.147e-3739.38Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR1_ARATH2.038e-3636.65Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH1.785e-3235.64Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH2.578e-3135.75Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
CHL1_ARATH5.743e-3135.05Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
PEPT1_DROME3.269e-1832.61Peptide transporter family 1 OS=Drosophila melanog... [more]
S15A3_HUMAN3.059e-1628.72Solute carrier family 15 member 3 OS=Homo sapiens ... [more]
S15A3_MOUSE6.815e-1627.04Solute carrier family 15 member 3 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC34104G04EF PostHarvP1 Citrus clementina cDNA clone C34104G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931403 ID=FC931403; Name=FC931403; organism=Citrus clementina; type=EST; length=714bp
CGATGAACTTTGAGCACTCTTCTCCAGACACCAAGGAGAAGAACAGTAAG
ACAGCAGTTGTTGCGACAGATGATGAGCCTCAGCTCAACTACAGGGGATG
GAAATCAATGCCTTTTGTTATAGGAAATGAAACTTTTGAAAAGCTGGGGA
CTACTGGCACTTCCTCCAACCTCTTGGTATATTTGACAACCATATTCAAC
ATGAAAAGTATCACGGCAACAACTCTCATTAACATCTTCAGTGGTACCAC
AAATTTTGCCACCTTGCTCGGAGCATTCCTGTCCGATACTTACTTTGGCC
GGTACAAGACTCTGGGATTCGCTTCTGTTGCCTCTTTTCTGGGGATGCTT
GTACTTTCTTTGACAGCAGCAATCTCAAAACTGCACCCACCTGATTGTGG
AAATCAAGATTCTGGAGCGTGCCCTGGGCCAACACCATGGCAACTGGCTT
TTCTGTTCACTGGGCTAGGACTGATGGTAATTGGAGCTGGCGGCATTAGG
CCATGTAACTTGGCCTTTGGTGCTGACCAATTTAATCCCAATACTGAATC
TGGGAAGCAGGGAATCACCAGCTTCTTCAATTGGTACTACTTCACCTTCA
CCTTCGCGATGATGATATCTTTGACAGTCATTGTTTACGTGCAATCGGAT
GTGAGCTGGGCCTGGGGATTGGGAATCCTGCATTTATGATGTTCTTATCC
TGTGCAATGTTCTT
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