FC931481

Overview
NameFC931481
Unique NameFC931481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.077e-77
Identity = 147/216 (68.06%), Postives = 167/216 (77.31%), Query Frame = 3
Query:   81 QVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIRVATKFGFVELGFTSVI-----VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGF 713
            +VPR+KLG+QGLEVS  G GCM +S  Y  P  E D I +I HA + GIT  DT+D YGP+TNEILLGKALK   RE + +ATKFG V LG          V G P YVR+ CEASL+RLD++ IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD+E EI+P CRELGIGIV Y PLGRGF
Sbjct:    7 KVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIV-LGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGF 221          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.932e-75
Identity = 139/213 (65.26%), Postives = 161/213 (75.59%), Query Frame = 3
Query:   78 LQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFF 716
            + VPR+KLG+QGLEVS  G GCM +S  Y  P  E + I +I HA   G+TF DT+D YGP+TNE+LLGKAL+   RE + +ATKFG V        + G P YVR+ CE S +RL V+ IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD E +I+P CRELGIGIV Y PLGRGFF
Sbjct:    6 VSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFG-VSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFF 217          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 95/217 (43.78%), Postives = 135/217 (62.21%), Query Frame = 3
Query:   78 LQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR-ENIRVATKFGFVELGFTSVI-VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE---IVPLCRELGIGIVPYCPLGRGF 713
            + +P  K+G     V  +GFGCM L   Y  P SEE   +++ HA   G TF+D++D YG   NE  +G+  K+  R + I +ATKFG+ +   T  + +   P+Y+    + SL+RL ++ IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV Y PLGRGF
Sbjct:    1 MSIPTRKIGND--TVPAIGFGCMGLHAMYG-PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGF 214          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29
Identity = 77/206 (37.38%), Postives = 116/206 (56.31%), Query Frame = 3
Query:   99 LGTQGLEVSKLGFGCMSLSGGYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            LG   L+V ++GFG  ++ G    P L++E G  +++ A   G+ F DTA  YG   +E L+G+ ++E   R  + +ATK    E+   S+ +  + E++RS  E SL+RL  +YIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  +PY PL  G
Sbjct:    7 LGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVD-GSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASG 211          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29
Identity = 77/221 (34.84%), Postives = 119/221 (53.85%), Query Frame = 3
Query:   90 RVKLGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIRVATKFGFV---------ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            ++ LGT  + +S++G G  ++ GG  +N  L  +  I  I  A   GI   DTA  Y    +E+++G+ALK+LPRE + V TK G V         ++G   +    +PE +R    ASL+RL ++YID+Y  H         PI ET+  + +L  EGKI+ IG +    D IR       +  +Q ++S+  R +ENE++PLCR+ GI +  Y PL +G
Sbjct:    3 KIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQG 223          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.059e-28
Identity = 78/207 (37.68%), Postives = 121/207 (58.45%), Query Frame = 3
Query:  111 GLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYG---PYTNEILLGKALKELPRENIRV--ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE-NEIVPLCRELGIGIVPYCPLGRG 710
            G +V  +GFG M L+        +E+   ++ +A S+G  ++D  + YG   P +N  LL +  ++ P    +V  + K G   L F +++  G P++V    E  +  L   + +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE N I+ +CR+L I I+ Y P  RG
Sbjct:    6 GFKVGPIGFGLMGLTWKPKQT-PDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGG---LDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRG 208          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 80/222 (36.04%), Postives = 124/222 (55.86%), Query Frame = 3
Query:   51 AASMAEDKKLQVPRVKLGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            AAS A D   Q   VK+G   + V+++GFG M ++G   ++ P  +E  I+ +K      I F DTAD YGP  +E LL +AL   P + + +ATK G V  G       G P+++R     S+RRL V+ IDL+  HR+D  VP ++   E+  + +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R  E +++  C + GI  +P+ PL  G
Sbjct:    5 AASSAVDAS-QAGTVKVGD--MVVNRMGFGAMRVTGDGIWDEPKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREAL--YPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRKNE-KVLEYCEQKGIAFIPWYPLASG 220          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27
Identity = 67/208 (32.21%), Postives = 115/208 (55.29%), Query Frame = 3
Query:   90 RVKLGTQGLEVSKLGFGCMSLSGGYNSP-LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            + KLG   L+V  +G G  ++ G    P L+EE G  +++ A   G+T  DTA  YG   +E L+G+ L+E  RE++ +ATK    + G    +   +P++++   + SL+RL+ +YIDL+Y H  D   P +E +  + ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E    P  +E  I  +PY PL  G
Sbjct:    3 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQG-NDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSG 209          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.608e-26
Identity = 77/215 (35.81%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   99 LGTQGLEVSKLGFGCMSLS----GGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPR-ENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            LG   L VS+L  GCM+      G +   L EE    IIK A   GI FFDTA+ Y   ++E ++G+AL++  R E++ VATK  F  +G     +    + +RS  + SLRRL ++Y+D+   HR D + PIEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E E++PLC + G+ ++P+ PL RG
Sbjct:    6 LGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKV-FHRVGDLPEGLSRA-QILRSI-DDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARG 217          
BLAST of FC931481 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.605e-23
Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 3
Query:  111 GLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL-PRENIRVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 710
            G+E S++G G  ++ G       E+  I  I+ A  +GIT  DTA  YG   +E ++GKA+KE   R+ + +ATK   ++     +        +    E SL+RL  +YIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG
Sbjct:   10 GIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTA-LDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRG 209          
The following BLAST results are available for this feature:
BLAST of FC931481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
A115_TOBAC1.077e-7768.06Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE2.932e-7565.26IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO8.060e-4143.78Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU3.177e-2937.38Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
YDJG_ECOLI4.149e-2934.84Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
PLR1_SCHPO2.059e-2837.68Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YH5B_SCHPO3.512e-2836.04Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
IOLS_BACSU5.072e-2732.21Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YAJO_ECOLI5.608e-2635.81Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
GS69_BACSU2.605e-2334.33General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34105E12EF PostHarvP1 Citrus clementina cDNA clone C34105E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931481 ID=FC931481; Name=FC931481; organism=Citrus clementina; type=EST; length=716bp
GACTTAACTACTTATTGAAAGAATACTAAAACAAAGAAACCGAAATTCTA
GCTGCAAGTATGGCAGAAGATAAGAAACTCCAAGTTCCAAGAGTGAAACT
TGGAACCCAAGGCCTTGAGGTTTCAAAGCTGGGGTTTGGATGCATGAGCC
TCAGTGGCGGCTATAATTCTCCACTCTCTGAAGAGGATGGCATCTCAATA
ATAAAGCATGCTTTCAGTAAAGGAATCACTTTCTTTGACACTGCTGATAA
ATATGGACCATATACTAATGAAATTCTTCTTGGAAAGGCCTTGAAGGAGT
TACCTAGAGAAAACATACGAGTGGCCACAAAGTTTGGGTTTGTAGAATTG
GGATTTACTTCTGTGATCGTGAAGGGTACCCCTGAGTATGTGCGCTCGTG
TTGTGAAGCTAGTTTGAGGCGCCTTGATGTGGAATATATTGATCTGTACT
ATCAACATAGAGTGGACACATCAGTTCCCATAGAGGAAACCATTGGCGAA
ATGAAAAAGCTGGTGGAAGAGGGTAAAATCAAGTACATAGGATTATCTGA
GGCTAGCCCAGATACAATTAGGAGAGCACATGCTGTTCATCCCATCACAG
CTGTACAACTGGAATGGTCCCTTTGGGCTCGTGACATTGAGAATGAGATA
GTACCACTTTGCAGGGAGCTTGGCATTGGAATAGTTCCATACTGTCCTCT
TGGTCGTGGATTTTTC
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