FC931490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 356.295 bits (913), Expect = 9.745e-98 Identity = 180/235 (76.60%), Postives = 206/235 (87.66%), Query Frame = 3 Query: 48 KTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLA-LY*DVSWLV------LSGELIMGIF 731 K +TIQ+AVGVVGCIIMPHNVFLHSALVQSR++D +K RVQEAL YY+IESTIAL +SF+INLFVTTVFAKGFY T+ AN+IGLVNAGQYLQEKYGGG+FPILYIW IGLLAAGQSSTITGTYAGQFIMGGFLN ++KKW+RALITRSCAI+PTIIVALVFD+SE LDVLNEWLNVLQS+QIPFALIPLL LVS+E IMG+FK+ LY ++WLV ++G L++ F Sbjct: 230 KLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSREVDKRQKYRVQEALNYYTIESTIALFISFLINLFVTTVFAKGFYNTDLANSIGLVNAGQYLQEKYGGGVFPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDVLNEWLNVLQSIQIPFALIPLLCLVSKEQIMGSFKIGPLYKTIAWLVAALVIMINGYLLLEFF 464
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 2.171e-97 Identity = 179/231 (77.49%), Postives = 204/231 (88.31%), Query Frame = 3 Query: 60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLA-LY*DVSW------LVLSGELIMGIF 731 +TI+QAVGVVGC+IMPHNVFLHSALVQSR ID +K RVQEAL YY IES++AL +SFMINLFVTTVFAKGFYGTE+ANNIGLVNAGQYLQEK+GGGL PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRA+ITRSCAIVPT+IVA+VF+TSE LDVLNEWLNVLQSVQIPFAL+PLL LVS+E IMG FK+ + ++W ++++G L++ F Sbjct: 246 KTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALNYYLIESSVALFISFMINLFVTTVFAKGFYGTEKANNIGLVNAGQYLQEKFGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAIVPTMIVAIVFNTSEASLDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMGDFKIGPILQRIAWTVAALVMIINGYLLLDFF 476
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.484e-93 Identity = 173/235 (73.62%), Postives = 202/235 (85.96%), Query Frame = 3 Query: 48 KTQFQTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKL-ALY*DVSWLV------LSGELIMGIF 731 K +TI+QAVG+VGCIIMPHNVFLHSALVQSR++D K+ RV+EAL+YYSIEST AL VSF+IN+FVTTVFAK FYGTE A+ IGL NAGQYLQ+KYGGG FPILYIW IG+LAAGQSSTITGTYAGQFIMGGFLNL++KKW+RALITRSCAI+PT+IVALVFD+S+ MLD LNEWLNVLQSVQIPFA+IPLL LVS E IMG+FK+ L +SW+V ++G L++ F Sbjct: 226 KLSSRTIKQAVGIVGCIIMPHNVFLHSALVQSREVDPKKRFRVKEALKYYSIESTGALAVSFIINVFVTTVFAKSFYGTEIADTIGLANAGQYLQDKYGGGFFPILYIWAIGVLAAGQSSTITGTYAGQFIMGGFLNLKMKKWVRALITRSCAIIPTMIVALVFDSSDSMLDELNEWLNVLQSVQIPFAVIPLLCLVSNEQIMGSFKIQPLVQTISWIVAALVIAINGYLMVDFF 460
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.941e-86 Identity = 156/204 (76.47%), Postives = 182/204 (89.22%), Query Frame = 3 Query: 60 QTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKL 671 +TI++AVGVVGC+I PHNVFLHSALVQSR D + RVQEAL YY+IES+ AL VSFMINLFVT VFAKGFYGT+QA++IGLVNAG YLQEKYGGG+FPILYIWGIGLLAAGQSSTITGTYAGQFIM GFL+L++++W+ A ITRS AIVPT+ VA++F+TSE LDVLNEWLN+LQS+QIPFA+IPLL +VS EHIMG FK+ Sbjct: 248 KTIREAVGVVGCVITPHNVFLHSALVQSRKTDPKEINRVQEALNYYTIESSAALFVSFMINLFVTAVFAKGFYGTKQADSIGLVNAGYYLQEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAIVPTMFVAIMFNTSEGSLDVLNEWLNILQSMQIPFAVIPLLTMVSNEHIMGVFKI 451
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.332e-54 Identity = 105/199 (52.76%), Postives = 145/199 (72.86%), Query Frame = 3 Query: 66 IQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYGTEQANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGT 662 I QAVG++G ++MPHN++LHSALVQSR+ID + +V+ A +Y +ES AL++SF+INL + +VFAKGFYG + IGL +A +L +KYG YIW IGL +AGQ ST+TGTY+GQF+M GFL L++ W R LITR AIVP ++VA++ S LD L++WLN+LQS+Q+PFA++P+L S E IMG+ Sbjct: 254 ISQAVGILGAVVMPHNIYLHSALVQSREIDRKSETQVKIANKYNRLESAFALIISFIINLLLVSVFAKGFYG--ETTEIGLSSAADFLMDKYGK---VAKYIWAIGLFSAGQCSTMTGTYSGQFVMEGFLKLKIAPWKRLLITRCTAIVPAMVVAIL---STSHLDSLDQWLNILQSIQLPFAVVPVLLFTSSEKIMGS 444
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 8.938e-51 Identity = 110/239 (46.03%), Postives = 157/239 (65.69%), Query Frame = 3 Query: 66 IQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYG------TEQANNIGLVNAGQYLQEK-------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722 I+QAVG+VG +IMPHN++LHSALV+SR ++ + K V+EA +Y+ IES IAL VSF+IN+FV +VFA+ F+G E N +AG + ++ Y GG+ LYIW +G+LAAGQSST+TGTY+GQF+M GFLNL+ ++ R ++TRS AI+PT++VA+ D + L +N++LNVLQS+Q+PFALIP+L S +M F L W + G L++ Sbjct: 253 IEQAVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDV--EHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGL----GWRIAGGILVL 485
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_RAT (Natural resistance-associated macrophage protein 1 OS=Rattus norvegicus GN=Slc11a1 PE=2 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 4.904e-49 Identity = 110/220 (50.00%), Postives = 146/220 (66.36%), Query Frame = 3 Query: 72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY--GTEQANNIGLVNAGQYLQEK-------------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665 QAVG+VG IIMPHN++LHSALV+SR++D +++G V+EA Y+ E+TIAL VSF+INLFV VF + FY E+A NI N+ + K Y GG+ LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR ++ R L+TRSCAI+PT++VA+ D + L LN+ LNVLQS+ +PFA++P+L S +M F Sbjct: 199 QAVGIVGAIIMPHNIYLHSALVKSREVDRTRRGDVREANMYFLTEATIALFVSFIINLFVMAVFGQAFYQQTNEEAFNI-CANSSLHNYAKIFPRDNNTVSVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLVAVFRDLRD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEF 415
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.365e-49 Identity = 106/239 (44.35%), Postives = 154/239 (64.44%), Query Frame = 3 Query: 66 IQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYG------TEQANNIGLVNAGQYLQEK-------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722 ++QAVG+VG +IMPHN++LHSALV+SR ++ + K V+EA +Y+ IES IAL VSF+IN+FV +VFA+ F+ E N +A + + Y GG+ LYIW +G+LAAGQSST+TGTY+GQF+M GFLNL+ ++ R ++TRS AI+PT++VA+ D + L +N++LNVLQS+Q+PFALIP+L S +M F + W + G L++ Sbjct: 253 VEQAVGIVGAVIMPHNMYLHSALVKSRQVNRANKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFEKTNEQVVEVCRNSSSPHADLFPNDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVILTRSIAIIPTLLVAVFQDV--EHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSEFSNG----IGWRIAGGILVL 485
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.093e-48 Identity = 106/239 (44.35%), Postives = 154/239 (64.44%), Query Frame = 3 Query: 66 IQQAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFYG------TEQANNIGLVNAGQYLQEK-------YGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTFKLALY*DVSWLVLSGELIM 722 ++QAVG+VG +IMPHN++LHSALV+SR ++ + K V+EA +Y+ IES IAL VSF+IN+FV +VFA+ F+ E N +A + + Y GG+ LYIW +G+LAAGQSST+TGTY+GQF+M GFLNL+ ++ R ++TRS AI+PT++VA+ D + L +N++LNVLQS+Q+PFALIP+L S +M F + W + G L++ Sbjct: 253 VEQAVGIVGAVIMPHNMYLHSALVKSRQVNRANKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFEKTNKQVVEVCKNNSSPHADLFPSDNSTLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVILTRSIAIIPTLLVAVFQDV--EHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSEFSNG----IGWRIAGGILVL 485
BLAST of FC931490 vs. ExPASy Swiss-Prot
Match: NRAM1_MOUSE (Natural resistance-associated macrophage protein 1 OS=Mus musculus GN=Slc11a1 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.427e-48 Identity = 110/219 (50.23%), Postives = 146/219 (66.67%), Query Frame = 3 Query: 72 QAVGVVGCIIMPHNVFLHSALVQSRDIDNSKKGRVQEALRYYSIESTIALVVSFMINLFVTTVFAKGFY--GTEQANNI----GLVNAGQYLQ--------EKYGGGLF-------PILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSCAIVPTIIVALVFDTSEDMLDVLNEWLNVLQSVQIPFALIPLLYLVSQEHIMGTF 665 QAVG+VG IIMPHN++LHSALV+SR++D +++ V+EA Y+ IE+TIAL VSF+INLFV VF + FY E+A NI L N + + Y GG+ LYIW +GLLAAGQSST+TGTYAGQF+M GFL LR ++ R L+TRSCAI+PT++VA+ D + L LN+ LNVLQS+ +PFA++P+L S +M F Sbjct: 240 QAVGIVGAIIMPHNIYLHSALVKSREVDRTRRVDVREANMYFLIEATIALSVSFIINLFVMAVFGQAFYQQTNEEAFNICANSSLQNYAKIFPRDNNTVSVDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLVAVFRDLKD--LSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEF 456 The following BLAST results are available for this feature:
BLAST of FC931490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931490 ID=FC931490; Name=FC931490; organism=Citrus clementina; type=EST; length=733bpback to top |