FC931555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.347e-41 Identity = 88/144 (61.11%), Postives = 104/144 (72.22%), Query Frame = 3 Query: 231 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TLA 662 KP +L+ EKLG+AG++LL EF +VDC+Y+LSPE+L K++ DALIVRSGTKV R+VFE++ GRLKVVGRAGVGIDNVDL AATE GCL RNVAQADAS AGKW+R +YVGVSLVG TLA Sbjct: 82 KPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLA 225
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21 Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 +L+ + L + + +L E V+ A L+ EEL KI D L+VRSGTKV RDV E A +LKV+GRAGVG+DN+D+ AATE G + RN+ QA AS G+W RK++ G+ L G TL Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIE-KAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTL 142
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.753e-19 Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 VLIA+ + + G+ L E A V ++PEEL I DA++VRS TKV R+V E +A RLK++ RAGVG+DNVD+ AAT+ G + R +A AD S GKW++ +++G+ L G TL Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIE-AAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTL 144
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16 Identity = 51/115 (44.35%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW+RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTL 148
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16 Identity = 51/115 (44.35%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW+RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTL 148
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16 Identity = 51/115 (44.35%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW+RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTL 148
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 2.672e-16 Identity = 51/115 (44.35%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW+RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTL 148
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_SYNY3 (D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=serA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16 Identity = 45/140 (32.14%), Postives = 75/140 (53.57%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 VL+++ + Q G+D+L + A VD LS E+ + DA+++RS TKV + ++ + +LK++GRAGVG+DN+D+ AAT G + R++ A+ S KW+RKQ++G + TL Sbjct: 32 VLVSDSIDQVGIDILKQVAQVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGS-QLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYKKTL 170
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16 Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTL 148
BLAST of FC931555 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 4.559e-16 Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASX*AGKWQRKQYVGVSLVG*TL 659 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS GKW RK+++G L G TL Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTL 148 The following BLAST results are available for this feature:
BLAST of FC931555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931555 ID=FC931555; Name=FC931555; organism=Citrus clementina; type=EST; length=664bpback to top |