FC931565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.708e-37 Identity = 76/191 (39.79%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 16 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGV-DSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 E+YDRA E+K FDE T +PR F +P +A+ +P S ++PTIDL GV +S +R ++V K+ A + GFFQ +NHG+ ++V+E+M+ I+ FH+Q PE++ Y R+ TK + Y SN DL+ S AASWRDTL + P P+ +++PE+C + +E++ V +L EL+F +L Sbjct: 3 ENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVV----MIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEIL 189
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.193e-35 Identity = 77/191 (40.31%), Postives = 110/191 (57.59%), Query Frame = 1 Query: 19 SYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 S+DRA E+K FDE+ + IPR F H LA+ +P +PTIDL G D D +E I A+ + GFFQV+NHG+ +E+LE+M ++ FHEQPPE++ +Y R+ + Y+SN DL+ + AA+WRDT + P PE +++PEICR +E++ V LGE LF LL Sbjct: 9 SFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELL 199
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.658e-35 Identity = 74/190 (38.95%), Postives = 110/190 (57.89%), Query Frame = 1 Query: 22 YDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 +DRA E+K FDE+ + +PR F HP L+ +P +PTIDL G D D R +E+I A+ + GFFQV+NHG+ +E+LE+M + ++ FHEQ E++ Y R+ ++ Y+SN DLF S AA+WRDT + P P+ +++PEICR +E++ V LG+ LF LL Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELL 199
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.250e-34 Identity = 80/196 (40.82%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 1 TIMSLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL-RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 ++ + + DR+ +K FDE+ T IP F PPATL +P S + +PTIDL G +D + R ++VEKI A+ + GFFQV+NHGI ++VLE+M+ I+ FHEQ E+K Y R+ + Y SN DLF S AA+WRDTL P P E++P C + +E++ V +LG+LLF LL Sbjct: 4 SLPQVAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSS---DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELL 196
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.783e-31 Identity = 75/193 (38.86%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 16 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDLR-PTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSK--AASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 ESYD+ E+K FD++ T +P+ F+ PP + ++K V P IDL G+D D ++ IV+K+ AS + GFFQVVNHGI VL+R ++ + F EQ E+K Y R+ K V Y SN+DL+ S AASWRDT+ + P P L+E P C + ++++ VK+LG L LL Sbjct: 8 ESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPP------KDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELL 194
BLAST of FC931565 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.278e-29 Identity = 73/195 (37.44%), Postives = 114/195 (58.46%), Query Frame = 1 Query: 10 SLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDV-VPTIDLSGVDSD-DLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRREN-TKGVSYISNIDLFHSKAASWRDTLQIRLGPTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLL 585 +L + +E+K FDE+ T IPR FI P L + S R SD+ +P I+L+G+ S+ ++R IVEKI AS + GFFQ+VNHGI +V+++MV ++ FHEQ +IK Y R+ K Y SN L A +WRDT++ + +P+ +E P++CR ++++++V+ LG +LF LL Sbjct: 35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRI---SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELL 226 The following BLAST results are available for this feature:
BLAST of FC931565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931565 ID=FC931565; Name=FC931565; organism=Citrus clementina; type=EST; length=587bpback to top |