FC931574

Overview
NameFC931574
Unique NameFC931574
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y464_SYNE7 (UPF0133 protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_0464 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            ++L   E +G  +G L+KV +SGNQ+P+R EI   A+  GAE LS LV  A KDA+QKS  AMKE+M  L   LG+P
Sbjct:   35 EDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPEALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y1054_SYNP6 (UPF0133 protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1054_d PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            ++L   E +G  +G L+KV +SGNQ+P+R EI   A+  GAE LS LV  A KDA+QKS  AMKE+M  L   LG+P
Sbjct:   35 EDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAPEALNEGAEVLSELVAAAMKDAYQKSTAAMKEKMEALTAGLGIP 111          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y2554_CYAP8 (UPF0133 protein PCC8801_2554 OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_2554 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.603e-12
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            +EL   E +G+ EG+L+KV +SGNQ+P    I   A+E GA++LS LVT+A KDA+ +S   M+ +M +L   L +P
Sbjct:   36 QELEQMEIEGFSEGKLVKVIMSGNQEPRSVTILPEALEKGADELSQLVTDAMKDAYTQSTETMRTKMEELTSGLNLP 112          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y5067_ANASP (UPF0133 protein alr5067 OS=Anabaena sp. (strain PCC 7120) GN=alr5067 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.146e-12
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            +EL   E  G   G L+KV +SGNQ+P R EI+  A+  GA+ LS LVT A KDA+ KS   M+ERM DL   L +P
Sbjct:   37 EELEQMEIQGEAGGGLVKVIVSGNQEPKRVEISPDALAQGADLLSDLVTAAMKDAYIKSTATMRERMEDLTSGLELP 113          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y2322_ANAVT (UPF0133 protein Ava_2322 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_2322 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            +EL   E  G   G L+KV +SGNQ+P R EI+  A+  GA+ LS LVT A KDA+ KS   M+ERM DL   L +P
Sbjct:   37 EELEQMEILGEAGGGLVKVIVSGNQEPKRVEISPDALAQGADLLSDLVTAAMKDAYIKSTATMRERMEDLTSGLELP 113          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y899_CYAP4 (UPF0133 protein Cyan7425_0899 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=Cyan7425_0899 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.984e-11
Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            ++L   E +G   G L+KV +SGNQ+P R EI+   M  GAE ++ LVT A KDA+ KS   M+ERM +L   L +P
Sbjct:   36 EDLEKMEIEGVAAGGLVKVIMSGNQEPRRVEISPDLMSEGAEVVADLVTAAMKDAYLKSTTTMRERMEELTGGLSLP 112          
BLAST of FC931574 vs. ExPASy Swiss-Prot
Match: Y448_NOSP7 (UPF0133 protein Npun_F0448 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F0448 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 1
Query:   31 KELAAAEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVLAMKERMSDLAQSLGMP 261
            +EL   E  G   G L+KV +SGNQ+P R EI+  A+  GAE LS LVT A K+A+ KS   M+ERM +L   L +P
Sbjct:   37 EELEQMEILGESGGGLVKVIVSGNQEPKRVEISPDALAEGAEVLSDLVTVAMKEAYNKSTATMRERMEELTSGLELP 113          
The following BLAST results are available for this feature:
BLAST of FC931574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y464_SYNE71.910e-1350.65UPF0133 protein Synpcc7942_0464 OS=Synechococcus e... [more]
Y1054_SYNP61.910e-1350.65UPF0133 protein syc1054_d OS=Synechococcus sp. (st... [more]
Y2554_CYAP83.603e-1244.16UPF0133 protein PCC8801_2554 OS=Cyanothece sp. (st... [more]
Y5067_ANASP6.146e-1249.35UPF0133 protein alr5067 OS=Anabaena sp. (strain PC... [more]
Y2322_ANAVT1.788e-1149.35UPF0133 protein Ava_2322 OS=Anabaena variabilis (s... [more]
Y899_CYAP43.984e-1145.45UPF0133 protein Cyan7425_0899 OS=Cyanothece sp. (s... [more]
Y448_NOSP76.795e-1148.05UPF0133 protein Npun_F0448 OS=Nostoc punctiforme (... [more]
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Properties
Property NameValue
Genbank descriptionC34106F06EF PostHarvP1 Citrus clementina cDNA clone C34106F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931574 ID=FC931574; Name=FC931574; organism=Citrus clementina; type=EST; length=551bp
GGTGGTTCAAGTTGAGGCAGTGCGGGTGCAAAAGAACTGGCTGCAGCTGA
GTTTGATGGTTATTGTGAGGGTGAGCTGATTAAGGTAACATTATCTGGAA
ACCAGCAACCAGTACGCACTGAGATCACAGAGGCGGCAATGGAATTAGGT
GCAGAAAAACTTTCACTCTTAGTTACTGAGGCATACAAGGATGCACACCA
GAAGAGTGTACTGGCCATGAAGGAGAGAATGAGTGATCTTGCTCAGAGCT
TAGGAATGCCTCAAGGTCTAAGTGAGGGATTAAAGTAAGAACGTCCACTC
ACCAGTATCTAAGATAGAGCTTCAATTTTGTCTACAGACCAGGCTGAATG
GCAATCCATATTGTGATCTTAAGATTTACTCAGCTGTTCAATATCATTCT
GGCTTAAATTGAGTAGAGTAACTCTAGTTGGAACTTGTGATCTTTGTTCA
CCTCCCCCATTGTAACAATTACAGGAAATTTGACCTTTTTTTGTTGATGC
ATTTATAATTATAGTTTTTTTTTTGAAAAANAAAAAAAAAAAAAAAAAAA
A
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