FC931580

Overview
NameFC931580
Unique NameFC931580
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length518
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931580 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.225e-16
Identity = 41/82 (50.00%), Postives = 52/82 (63.41%), Query Frame = 1 
Query:    4 VSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEK 249
            ++GFFAS  SLPFD+VKT++QK      GK PY G +DC  K  K  G F+FY GF  Y VRIAPH M+T +  + +  L K
Sbjct:  250 IAGFFASFFSLPFDFVKTRLQKQTRGPDGKLPYNGMVDCFAKVAKQEGVFRFYRGFGTYYVRIAPHAMVTLLVADYLGWLTK 331
[Close]
BLAST of FC931580 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 1 
Query:    1 TVSGFFASACSLPFDYVKTQIQKMQPDAQGKYPYTGSMDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKK 252
            T + F A+  + P D +KT+I        G+  Y G+ DC  KTL+A G   FY GF  Y +R+ P  ++T+IF+ Q+  L KK
Sbjct:  229 TTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQLNILWKK 312
The following BLAST results are available for this feature:
BLAST of FC931580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
M2OM_NEUCR1.225e-1650.00Putative mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_DICDI5.888e-1138.10Probable mitochondrial 2-oxoglutarate/malate carri... [more]
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Properties
Property NameValue
Genbank descriptionC34106F12EF PostHarvP1 Citrus clementina cDNA clone C34106F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931580 ID=FC931580; Name=FC931580; organism=Citrus clementina; type=EST; length=518bp
ACAGTGTCAGGGTTCTTTGCTTCAGCTTGCAGTTTACCCTTTGATTATGT
CAAAACACAAATTCAGAAAATGCAACCAGATGCTCAAGGAAAGTATCCAT
ACACAGGCTCTATGGACTGTGCCATGAAAACCCTCAAGGCTGGTGGACCA
TTCAAATTTTACACTGGTTTCCCTGTGTACTGTGTTCGGATTGCTCCTCA
TGTCATGATGACTTGGATATTCCTCAACCAGATCCAAAAGCTTGAGAAGA
AAGTGGGGTTGTAGTCTTTGACATGAATGAAGAATTCGGTTGGAAATGAG
TATTAAATAAATTGGCATTTTGTTTGTATTCCAGGCGGTTTTTGCACTTC
AGACCTTGAGAAATCAAACCATTTGTTTGGAATTCTTTACAATCACAATT
GATGTAGGACCTTCAAGAACCATCATGCCTGATTGATTATCTTTTTGGGT
GTGACTAAAGTAGGATACTTTTGACAACCATTTTGAATACGAGAGAGAGC
TTCTCTTGGAAAAACTAC
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