FC931805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_ARATH (D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At1g17745 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 4.854e-48 Identity = 97/152 (63.82%), Postives = 115/152 (75.66%), Query Frame = 3 Query: 231 KPTVLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 KP +L+ EKLG+AG++LL EF +VDC+Y+LSPE+L K++ DALIVRSGTKV R+VFE++ GRLKVVGRAGVGIDNVDL AATE GCL RNVAQADAS+KAGKW+R+KYVGVSLVGKTLAV+GFGK G Sbjct: 82 KPRILVTEKLGEAGVNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVG 233
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26 Identity = 63/149 (42.28%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 +L+ + L + + +L E V+ A L+ EEL KI D L+VRSGTKV RDV E A +LKV+GRAGVG+DN+D+ AATE G + RN+ QA AS+K G+W R ++ G+ L GKTL V+G G+ G Sbjct: 4 ILVTDPLHEDAIKILEEVGEVEVATGLTKEELLEKIKDADVLVVRSGTKVTRDVIE-KAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIGLGRIG 151
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFANVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 VLIA+ + + G+ L E A V ++PEEL I DA++VRS TKV R+V E+ A RLK++ RAGVG+DNVD+ AAT+ G + R +A AD SVK GKW++N+++G+ L GKTL ++G G+ G Sbjct: 6 VLIADSINEKGISELEEVAEVVVNTTITPEELLDAIKDFDAIVVRSRTKVTREVIEA-APRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIG 153
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIG 157
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIG 157
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIG 157
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW+R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIG 157
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_ARCFU (D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus GN=serA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.271e-21 Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 240 VLIAEKLGQAGLDLLNEFA-NVDCAYNLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 VL+AE + + +D + + V+ +S EEL ++ +A++VRS TKV+ +V ++ A LK++GRAGVG+DN+D+ AAT+ G + R + QAD SVK GKW+R K++G+ L GKT V+G G+ G Sbjct: 3 VLVAEPISEEAIDYMRKNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQA-AKNLKIIGRAGVGVDNIDINAATQRGIVVVNAPGGNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKFMGIELRGKTAGVIGLGRVG 151
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIG 157
BLAST of FC931805 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 3 Query: 315 NLSPEELCTKISLCDALIVRSGTKVNRDVFESSAGRLKVVGRAGVGIDNVDLAAATEFGCLXXXXXXXXXXXXXXXXXXXXXXXXRNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKXG 686 NLS EEL ++ C+ LIVRS TKV DV ++A +L+VVGRAG G+DNVDL AAT G L R + QA AS+K GKW R K++G L GKTL +LG G+ G Sbjct: 35 NLSKEELIAELQDCEGLIVRSATKVTADVI-NAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRIG 157 The following BLAST results are available for this feature:
BLAST of FC931805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931805 ID=FC931805; Name=FC931805; organism=Citrus clementina; type=EST; length=687bpback to top |