FC931820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931820 vs. ExPASy Swiss-Prot
Match: SDCG1_MOUSE (Serologically defined colon cancer antigen 1 homolog OS=Mus musculus GN=Sdccag1 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 3 Query: 12 PSRMFYKFGIVM*VCHSQAWDSKMVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEGMDDFEDSGHHKENSDIES-EKDDTDEKPVAESFSVP 401 P R + G M +C+S AWD++++TSAWWVY HQVSKTAPTGEYLT GSFMIRGKKNFLPP L+MGF LF++DES + H ER+VR ++E M+ ++E E D+ E+ E +P Sbjct: 584 PPRTLTEAG-TMALCYSAAWDARVITSAWWVYHHQVSKTAPTGEYLTTGSFMIRGKKNFLPPSYLMMGFSFLFKVDESCVWRHRGERKVRVQDEDMETLTSCTSELMAEEMEQLEGGDSSEEETEELHGMP 713
BLAST of FC931820 vs. ExPASy Swiss-Prot
Match: SDCG1_HUMAN (Serologically defined colon cancer antigen 1 OS=Homo sapiens GN=SDCCAG1 PE=1 SV=4) HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29 Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 3 Query: 12 PSRMFYKFGIVM*VCHSQAWDSKMVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEGMDDFEDSGHHKENSDIES-EKDDTDEKPVAESFSVP 401 P R + G M +C+S AWD++++TSAWWVY HQVSKTAPTGEYLT GSFMIRGKKNFLPP L+MGF LF++DES + H ER+VR ++E M+ + ++E + DT E P Sbjct: 586 PPRTLTEAG-TMALCYSAAWDARVITSAWWVYHHQVSKTAPTGEYLTTGSFMIRGKKNFLPPSYLMMGFSFLFKVDESCVWRHQGERKVRVQDEDMETLASCTSELISEEMEQLDGGDTSSDEDKEEHETP 715
BLAST of FC931820 vs. ExPASy Swiss-Prot
Match: YJY1_SCHPO (Uncharacterized protein C132.01c OS=Schizosaccharomyces pombe GN=SPCC132.01c PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 60 SQAWDSKMVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESS 248 S+AWDSK V SAWWV +VSK APTGE L GSF IR KKN+LPP LIMG+G+L++LDE S Sbjct: 639 SKAWDSKTVISAWWVRIDEVSKLAPTGEILPTGSFAIRAKKNYLPPTVLIMGYGILWQLDEKS 701 The following BLAST results are available for this feature:
BLAST of FC931820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931820 ID=FC931820; Name=FC931820; organism=Citrus clementina; type=EST; length=690bpback to top |