FC931838

Overview
NameFC931838
Unique NameFC931838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931838_ssr42 microsatellite FC931838_ssr42:42..53. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig13298 contig Ccv1_Contig13298:52..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 1.263e-91
Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            SPREENVYMAKLAEQAERYEEMV++MEKVVA+A   EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+ IKEYRSKIE+ELT IC GILKLLD KL+ +AA  DSKVFYLKMKGDYHRYLAEFKTG ERK AAENTL+AYK+AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 SPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.263e-91
Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            SPREENVYMAKLAEQAERYEEMV++MEKVVA+A   EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+ IKEYRSKIE+ELT IC GILKLLD KL+ +AA  DSKVFYLKMKGDYHRYLAEFKTG ERK AAENTL+AYK+AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 SPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.798e-91
Identity = 167/201 (83.08%), Postives = 187/201 (93.03%), Query Frame = 3
Query:   78 AAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            AA SPREENVY+AKLAEQAERYEEMV++MEKVVA+A  GEELT+EERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+ HVS I++YRSKIE+EL+ IC GILK+LD KL+ +A+  DSKVFYLKMKGDY+RYLAEFKTGDERK+AAENTL+AYK+AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 AASSPREENVYLAKLAEQAERYEEMVEFMEKVVAAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEGHVSTIRDYRSKIESELSSICDGILKVLDSKLIGSASGGDSKVFYLKMKGDYYRYLAEFKTGDERKLAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 200          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 6.266e-91
Identity = 169/200 (84.50%), Postives = 186/200 (93.00%), Query Frame = 3
Query:   81 APSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            APSPREENVY+AKLAEQAERYEEMV++MEKV A+A + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN DHVS I++YRSKIE EL+ ICGGILKLLD +L+P+AA+ DSKVFYLKMKGDYHRYLAEFKTG ERK AAE+TL+AYK+AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    4 APSPREENVYLAKLAEQAERYEEMVEFMEKVCAAADS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSTIRDYRSKIETELSNICGGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 199          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.307e-88
Identity = 166/201 (82.59%), Postives = 185/201 (92.04%), Query Frame = 3
Query:   78 AAPSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            AA +PREENVYMAKLAEQAERYEEMV++MEKV A+A + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+VI++YRSKIE+EL+ IC GILKLLD +L+P+A++ DSKVFYLKMKGDYHRYLAEFKTG ERK AAE+TL  YKSAQDIANAEL PTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 AAHTPREENVYMAKLAEQAERYEEMVEFMEKVSANADS-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRA---CN 199          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.802e-88
Identity = 165/196 (84.18%), Postives = 178/196 (90.82%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            REENVYMAKLAEQAERYEEMV +MEKV  S  T EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV  I+EYRSKIE+EL+ IC GILKLLD  L+P+A+A DSKVFYLKMKGDYHRYLAEFKTG ERK AAE+TL+AYK+AQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 REENVYMAKLAEQAERYEEMVSFMEKVSTSLGTSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVKCIQEYRSKIESELSNICDGILKLLDSCLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 195          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.485e-88
Identity = 165/198 (83.33%), Postives = 178/198 (89.90%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            S R+E VYMAKLAEQAERYEEMV +MEKVV +A  GEELT+EERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+ IK YRSKIE+ELT IC GILKLLD  L+ AA+  DSKVFYLKMKGDYHRYLAEFKTG ERK AAENTL++YKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 SSRDEFVYMAKLAEQAERYEEMVDFMEKVVTAADGGEELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTSIKTYRSKIESELTSICNGILKLLDSNLIRAASTGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSSYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.218e-87
Identity = 165/198 (83.33%), Postives = 180/198 (90.91%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            SPREENVYMA +A++AERYEEMV++MEKVVA A  GEELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+ IK+YRS+IE ELT IC GILKLLD KL+ +AA  DSKVFYLKMKGDY+RYLAEFKTG ERK AAENTL+AYKSAQDIAN ELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 SPREENVYMANVADEAERYEEMVEFMEKVVA-ALNGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 196          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.203e-87
Identity = 162/195 (83.08%), Postives = 178/195 (91.28%), Query Frame = 3
Query:   81 APSPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            AP+PREE VYMAKLAEQAERYEEMV++MEKV A+  + EELTVEERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN +HVSVI++YRSKIE EL+ IC GILKLLD +L+P+AA  DSKVFYLKMKGDYHRYLAEFK+G ERK AAE+TL AYKSAQDIAN EL PTHPIRLGLALNFSVFYYEILNSPDRA
Sbjct:    4 APTPREEFVYMAKLAEQAERYEEMVEFMEKVTAAVES-EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGILKLLDSRLIPSAALGDSKVFYLKMKGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRA 197          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.490e-87
Identity = 164/198 (82.83%), Postives = 178/198 (89.90%), Query Frame = 3
Query:   87 SPREENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRAWYPCN 680
            SPREENVY+AKLAEQAERYEEMV++MEKVV +    +ELT+EERNLLSVAYKNVIGARRASWRI+SSIEQ+EESRGN+DHV+ IK YRSKIE+ELT IC GILKLLD KL+  AA  DSKVFYLKMKGDY+RYLAEFKTG ERK AAENTL+AYKSAQDIAN ELAPTHPIRLGLALNFSVFYYEILNSPDRA   CN
Sbjct:    3 SPREENVYLAKLAEQAERYEEMVEFMEKVVGAGD--DELTIEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKTYRSKIESELTSICNGILKLLDSKLIGTAATGDSKVFYLKMKGDYYRYLAEFKTGAERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRA---CN 195          
The following BLAST results are available for this feature:
BLAST of FC931838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14336_SOLLC1.263e-9186.3614-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU1.263e-9186.3614-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
1433_HELAN4.798e-9183.0814-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
1433_OENEH6.266e-9184.5014-3-3-like protein OS=Oenothera elata subsp. hook... [more]
1433_PEA1.307e-8882.5914-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433B_TOBAC3.802e-8884.1814-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
1433F_TOBAC6.485e-8883.3314-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
14335_SOLLC3.218e-8783.3314-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
1433A_VICFA4.203e-8783.0814-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433A_TOBAC5.490e-8782.8314-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34201G03EF PostHarveN Citrus clementina cDNA clone C34201G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931838 ID=FC931838; Name=FC931838; organism=Citrus clementina; type=EST; length=699bp
GATCAATTCCAAATCGCCCACAAAATCTCCAAAAGAAAACCGAAAGAAAG
AAACAAACACAACTGAACGGAACAATGGCAGCCCCTTCTCCACGGGAAGA
AAACGTATACATGGCGAAACTTGCGGAGCAAGCCGAGCGGTACGAGGAGA
TGGTCCAATACATGGAAAAAGTCGTCGCCTCCGCCTCAACCGGCGAGGAA
CTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCAT
CGGCGCACGCCGCGCCTCCTGGCGCATCGTGTCCTCCATCGAGCAGGAGG
AGGAGTCGCGAGGCAACCAGGACCATGTCTCCGTGATTAAGGAGTACAGA
TCGAAGATCGAGGCCGAGTTGACGGAGATCTGTGGCGGGATCTTGAAATT
ATTGGACCAGAAATTGGTTCCCGCCGCTGCCGCTGCCGATTCCAAGGTGT
TTTATTTGAAGATGAAGGGAGATTATCATAGGTACTTGGCCGAGTTTAAG
ACTGGCGATGAGAGGAAAGTCGCCGCTGAGAATACTCTTAATGCCTATAA
ATCTGCTCAGGATATTGCAAATGCTGAACTGGCGCCAACTCATCCTATCC
GGCTAGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTTTGAAC
TCTCCCGATAGAGCCTGGTACCCTTGCAACAGGCCTTTGATGAAGCATC
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