FC931845

Overview
NameFC931845
Unique NameFC931845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14566 contig Ccv1_Contig14566:27..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931845 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 5.142e-53
Identity = 97/151 (64.24%), Postives = 120/151 (79.47%), Query Frame = 2 
Query:  242 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMLESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEVMGL 694
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  L++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYWND +VL+KLGE MG+
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGM 195
The following BLAST results are available for this feature:
BLAST of FC931845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH5.142e-5364.24Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC34201G10EF PostHarveN Citrus clementina cDNA clone C34201G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931845 ID=FC931845; Name=FC931845; organism=Citrus clementina; type=EST; length=695bp
ATTCTTAATTTTAAACCCAATCTAATCTCAATCTCCTTCACAGTCTCTCC
GATTCAGCAGCTGTTTAGTTCGCATGGCGTCTCCTCCCACCAAGGATGCT
CCCGCTGATAAGAAAGCAGAAGGATCGACCCCTAAGTCAGAAGCAACTTC
GGGGTCTGTTAGGGACTCATCCAGTTCGCCTTCCGCTGCTTCTGCTGCTT
CTGCTGCAAGTGCTTTTCCAGGAGTTGGTGGCGCTGCTCCAAATCCTTTT
GATTTCTCCGCCATGAGTGGCCTTCTTAATGATCCGAGCATTAAGGAACT
AGCTGAACAGATTGCGAAAGATCCAGCATTCAATTCCATGGCCGAGCAAC
TTCAGAAAACTTTGCATGGTGCAAATGCTGAGGAGAGTATTCCACAGTTT
GACACAACACAGTATTACTCCACCATGCAACAGGTTATGCAGAATCCTCA
GTTTATGACTATGGCTGAGCGCCTTGGTAATGCTTTAATGCAGGACCCAT
CAATGTCTCATATGCTGGAGAGTTTGACAAACCCTACAAAAAAAGACCAG
ATCGAGGAAAGAATGGCAAAAATCAAGGAAGATCCCTCTTTGAAGCCTAT
TTTGGATGAGATAGAGTCTGGTGGACCATCTGCTATGATGAAGTACTGGA
ATGATAAAGATGTTTTGCAGAAATTGGGTGAAGTAATGGGTCTTG
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