FC931946

Overview
NameFC931946
Unique NameFC931946
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1548 contig Ccv1_Contig1548:6..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.329e-62
Identity = 115/197 (58.38%), Postives = 151/197 (76.65%), Query Frame = 1
Query:   70 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLID 660
            ++RWSL+GMTALVTGGT+GIGYA+VEELA FGA V+TCSR++ +L++ +++W+ KG +VSG  CD+   +QR+ LME+V+S F+G LNILINNAGT IPK            +M TNFE++Y++ QLAHPLLK             AGVIA+P+ SI A+SKGA+NQ+TK+LACEWAKD IRVN+VAPWII TP+I+
Sbjct:   10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIE 206          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.244e-60
Identity = 115/210 (54.76%), Postives = 149/210 (70.95%), Query Frame = 1
Query:   70 EKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKVLKDSTFLEQAI 699
            E RWSLKG TALVTGG+KGIGYA+VEELA  GA V+TCSRNE EL++ ++ W+ KGL V G+ CDL  R +R+KLM+TV+  FDG LNIL+NNAG  I K            +M TNFE+AYH+SQ+A+PLLK            +AG  A+P  S+ ++SKGA+NQ+TK+LACEWAKD IRVNSVAP +I TPL++  +K +   ++ I
Sbjct:   14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI 223          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.868e-57
Identity = 108/203 (53.20%), Postives = 140/203 (68.97%), Query Frame = 1
Query:   67 REKRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKVLKD 675
            + +RWSLK  T LVTGGTKGIG+A+VEE A FGA++HTC+RNE ELN+ + +W+ KG QV+G+ CD  +R +REKLM+TVSS F G L+ILINN G    K             ++TN ESAYH+SQLAHPLLK            +AGV++  + SI +++KGA+NQL +NLACEWA D IR N+VAP +I TPL + V  D
Sbjct:    6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD 208          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 99/200 (49.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query:   76 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKVLKD 675
            RW+L+G TALVTGG++GIGY +VEELA+ GA V+TCSRN+ ELN  + +W+SKG +V  + CDL  R++R++LM TV++ F G LNIL+NNAG  I K            +M+ NFE+AYH+S LAHP LK            V+G +A+P  ++  ++KGAM+QLT+ LA EWAKD IRVN V P +I T L++  ++D
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD 203          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.072e-51
Identity = 97/200 (48.50%), Postives = 135/200 (67.50%), Query Frame = 1
Query:   76 RWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKVLKD 675
            RW+L+G TALVTGG++GIGY +VEELA  GA V+TCSRN+ EL++ + +W+SKG  V  + CDL  R++RE+ M+TVS+ F G LNIL+NNAG  I K            +M+ NFE+AYH+S LAHP LK            ++G  A+P  ++  ++KGAM+QLT+ LA EWAKD IRVN V P +I T +++  ++D
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQD 203          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15
Identity = 63/195 (32.31%), Postives = 94/195 (48.21%), Query Frame = 1
Query:  100 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQ---LAHPLL--KXXXXXXXXXXXXVAGVI-AIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKV 666
            ALVTG T GIG A+   LAA GA    C+R+E  L Q ++E + +G  V G  CD+   AQ    +     ++ G ++IL+NNAG                 V+TTN  S + +++    A  +L  K              GV+ A+P     ++SK  +  LTK L  E A+  I VN+V P  + TP+ ++V
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPY----SASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAERV 209          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: BDHA_RALEH (D-beta-hydroxybutyrate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hbdH1 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 1
Query:   85 LKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDK 663
            L G TALVTG T GIG  + + LAA GA +      + +  +       +G++V  +  D+   A+ E +M    S F G  +IL+NNAG                 ++  N  SA+H ++LA P +K              G++A    S   ++K  +   TK  A E A+  +  N++ P  + TPL+ K
Sbjct:    2 LNGKTALVTGSTSGIGLGIAKALAAQGANIIVNGFGDADAAKAEIAQAGQGIRVGYHGADMSKAAEIEDMMRYAQSDFGG-ADILVNNAGIQHVAAIEDFPPERWDAIIAINLTSAFHTTRLALPGMKQKDWGRIINVASTHGLVASAQKSAYVAAKHGIVGFTKVTALETAQTGVTANAICPGWVLTPLVQK 193          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 54/206 (26.21%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   79 WSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSS--QFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDKVLKDSTFLE 690
            +SL G  ALVTG ++GIG  + + LA +GA V    RN   L+     ++++GL+ S    D+     ++ +++ V++  +  G ++ILINNAG                 +M+TN  + + V Q     +             V   +A P  +   ++KGA+  LTK +A +W +  +++N +AP    T + ++++ D  F +
Sbjct:    7 FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDV---TDQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIVNICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFATEMTERLVADEEFTD 209          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14
Identity = 57/193 (29.53%), Postives = 89/193 (46.11%), Query Frame = 1
Query:   73 KRWSLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTF-IPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRT 648
            +R  L    ALVT  T GIG+A+   LA  GA V   SR +  +++ +   K +GL V+G  C +     RE+L+ T + +  G ++ILI+NA                   ++  N ++   +++   P +             +A     P       SK A+  LTKNLA E A+  +RVN +AP +IRT
Sbjct:    8 RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVAT-AVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRT 199          
BLAST of FC931946 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13
Identity = 59/194 (30.41%), Postives = 89/194 (45.88%), Query Frame = 1
Query:   82 SLKGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGMLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHVSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLIDK 663
            +L   T L+TGG  GIGYA V+      A V     +E +    +++  +  L       D+   A  +  +E+    F G L++LINNAG  I              V+  N    + +S+ A   +             V G++A P      +SKG + QLTK++A ++AK +IRVN V P II TPL +K
Sbjct:    2 NLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQT--DITDEAACQHAVESAVHTFGG-LDVLINNAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEK 192          
The following BLAST results are available for this feature:
BLAST of FC931946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
TRNH_DATST1.329e-6258.38Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN1_DATST1.244e-6054.76Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRNH1_ARATH2.868e-5753.20Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRN2_DATST1.247e-5249.50Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
TRN2_HYONI3.072e-5148.50Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
DHK1_STRVN1.219e-1532.31Granaticin polyketide synthase putative ketoacyl r... [more]
BDHA_RALEH1.348e-1428.50D-beta-hydroxybutyrate dehydrogenase OS=Ralstonia ... [more]
GNO_GLUOX1.761e-1426.21Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
DHRS4_BOVIN8.737e-1429.53Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
BACC_BACSU1.490e-1330.41Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionC34202H05EF PostHarveN Citrus clementina cDNA clone C34202H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931946 ID=FC931946; Name=FC931946; organism=Citrus clementina; type=EST; length=729bp
GAGATAAGATAGGAATGGTTGCTTTTTGGCCTTCTAACCAATAGGGGGAA
AAAAATGTCAGATTTTAGGGAGAAAAGGTGGTCTCTCAAGGGTATGACGG
CCCTTGTCACAGGTGGAACCAAAGGGATCGGATATGCCGTAGTAGAAGAA
CTAGCAGCATTTGGAGCAATAGTTCATACATGTTCCCGTAACGAAACAGA
GCTCAATCAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTCAAGTGAGTG
GCAATGCATGTGACCTGAAAATTAGAGCTCAGCGAGAGAAGCTGATGGAG
ACTGTCTCGTCTCAATTTGATGGCATGCTCAACATCCTTATTAACAATGC
TGGAACCTTCATACCTAAGGAAACCACAGAATTTACCGAGGAGGATTTCT
CAACTGTAATGACTACCAATTTTGAGTCTGCTTATCATGTGTCTCAACTT
GCACACCCCCTCTTAAAATCATCAGGAAATGGAAACATCATATTTATATC
CTCTGTTGCAGGCGTTATTGCTATACCAATGTGTTCCATAGCAGCATCGA
GTAAAGGGGCGATGAATCAACTCACAAAGAACTTGGCATGCGAGTGGGCA
AAAGACAAAATTCGTGTGAATTCAGTTGCACCATGGATCATTAGAACCCC
ACTCATTGATAAAGTATTGAAAGATTCTACGTTTCTGGAACAAGCAATCG
CATGATACTCCGTACTCCTATCCCCGACC
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