FC931955

Overview
NameFC931955
Unique NameFC931955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_YEAST (Probable quinone oxidoreductase OS=Saccharomyces cerevisiae GN=ZTA1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.887e-35
Identity = 76/197 (38.58%), Postives = 118/197 (59.90%), Query Frame = 1
Query:   64 SIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEILGREXXXXXXXXXPGTSGFQVGDRVAWLSTGGYAEYTAV-PVALTAKIPEGISDEDI---MASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVID 642
            +IP   K +++++ GG +V++Y+  YPVP+    +LL++N  +GVNYI++YFR G+YP  KP +LGRE          G + F+VGD+VA++S   +A+Y+ +       K+P+G SDE++    A  L  LT LSF  E Y V+KGD+VLL         ++ Q+LK+ GA  I  A   EK  + K  GA+ +I+
Sbjct:    4 TIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLIN 199          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_SCHPO (Probable quinone oxidoreductase OS=Schizosaccharomyces pombe GN=zta1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.518e-27
Identity = 72/191 (37.70%), Postives = 101/191 (52.88%), Query Frame = 1
Query:   88 VVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPKPEILGREXXXXXXXXXPGTSG-FQVGDRVAWLST-GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSV 654
            V V +TG   VLQ  T   +P P    L+++N  +G+NYIDTY RTGLY AP P I G+E               F+VGDRV +L+  G YA+YT VP  L +K+ E I  +   A+ L GLT  + ++E YPV+ GD V++H        L+ Q+L+     VI TA    K  +    GA++   Y  +
Sbjct:    6 VQVSKTGPSSVLQVITK-EIPKPAPNGLVIKNAYAGLNYIDTYLRTGLYTAPLPYIPGKEAAGVVAAVGDKVEADFKVGDRVVYLTPFGAYAQYTNVPTTLVSKVSEKIPLKIASAALLQGLTAYTLIEEAYPVKTGDTVVVHAAAGGVGLLLCQMLRARNVHVIATASTAAKRRIAIKNGAEIACSYEDL 195          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_PSEAE (Quinone oxidoreductase OS=Pseudomonas aeruginosa GN=qor PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25
Identity = 69/183 (37.70%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  106 GGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK-PEILGREXXXXXXXXXPGTSGFQVGDRVAWLS--TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDY 645
            GGPEVL+Y+   P   P   ++ VRN   G+N+IDTY+R+GLYPAP  P  LG E            + F+VGDRVA+ +   G Y+E   +       +P+GI  E   A  L GLT    +++TY ++ G+ +L H           Q  K LG ++IGT   PEK  L +  GA   IDY
Sbjct:   11 GGPEVLEYRDYQPAE-PGPREVRVRNRAIGLNFIDTYYRSGLYPAPGLPSGLGSEGAGEVEAVGSEVTRFKVGDRVAYATGPLGAYSELHVLAEEKLVHLPDGIDFEQAAAVMLKGLTTQYLLRQTYELRGGETILFHAAAGGVGLFACQWAKALGVQLIGTVSSPEKARLARQHGAWETIDY 192          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_SALTY (Quinone oxidoreductase OS=Salmonella typhimurium GN=qor PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24
Identity = 71/184 (38.59%), Postives = 91/184 (49.46%), Query Frame = 1
Query:  106 GGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK-PEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYR 648
            GGPEVLQ     P   P   ++ V N   G+N+IDTY R+GLYP P  P  LG E          G    +VGDRV +  +  G Y+    V     A +P+ IS E   ASFL GLTV   +++TY V+  +  L H        +  Q  K LGAK+IGT G  +K       GA  VI+YR
Sbjct:   11 GGPEVLQTVEFTPAE-PAEHEIQVENKAIGINFIDTYIRSGLYPPPSLPAGLGTEAAGVVSKVGNGVEHIRVGDRVVYAQSTLGAYSSVHNVTADKAAILPDAISFEQAAASFLKGLTVFYLLRKTYEVKPDEPFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRALDAGAWQVINYR 193          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_ECOLI (Quinone oxidoreductase OS=Escherichia coli (strain K12) GN=qor PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.169e-23
Identity = 68/184 (36.96%), Postives = 89/184 (48.37%), Query Frame = 1
Query:  106 GGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK-PEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYR 648
            GGPEVLQ     P   P   ++ V N   G+N+IDTY R+GLYP P  P  LG E          G    + GDRV +  +  G Y+    +     A +P  IS E   ASFL GLTV   +++TY ++  +  L H        +  Q  K LGAK+IGT G  +K       GA  VI+YR
Sbjct:   11 GGPEVLQAVEFTPAD-PAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR 193          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18
Identity = 66/213 (30.99%), Postives = 99/213 (46.48%), Query Frame = 1
Query:   28 SIMNQFIPIRNMSIPTTMKAVVVEQTGGP--EVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLY-PAPKPEI-LGREXXXXXXXXXPGTSG-FQVGDRVAWLSTGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRS 651
            S    F+  +  +IP TM+ +VV +      E +  +   PVP P  G LLVRN   G+N  D  +  G Y P+ KP   +G E            S  + VG  VA+++ G +AEYT VP ++   +P      + +   +SG T    ++E   + +G  VL+            Q+ KI    VIGT    EK A +KS+G D  I+YR+
Sbjct:   16 SYARHFLDFQGSAIPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLPGDGDLLVRNRFVGINASDINYSAGRYDPSLKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIAIPMPS--VKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRT 226          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18
Identity = 64/196 (32.65%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYPAPK--PEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSV 654
            M+AV V + GGPEVL+ ++   VP P+  Q+L++ +  GVN ++TY R+G Y      P   G +            S F+ GDRV   ST  GGYAEY         K+PE +  +   A  +   T    +  +  V+ G+ VL+H           QI +  G K++GTAG  E   +V   GA  V ++R V
Sbjct:    8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREV 203          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH2_PICST (Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18
Identity = 69/231 (29.87%), Postives = 101/231 (43.72%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYP--APKPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MSIPTT KAV+ E  GGP  L YK   PVP P+  +LL+    SGV + D +   G +P     P + G E            +G+++GD   + W++                            G + +Y        A+IP+G     I     +G+TV   +K T  +Q G WV +         L  Q  K +G +V+G  GG +K    KSLGA+V +D+ S +D
Sbjct:    1 MSIPTTQKAVIFETNGGP--LLYK-DIPVPKPKPNELLINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVALGENVTGWEIGDYAGIKWINGSCLQCEYCVTAHESNCPDADLSGYTHDGSFQQYATADAIQAARIPKGTDLALIAPILCAGITVYKALK-TAQLQAGQWVAVSGAAGGLGSLAIQYAKAMGYRVVGIDGGADKGEFAKSLGAEVFVDFLSSKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18
Identity = 68/231 (29.44%), Postives = 100/231 (43.29%), Query Frame = 1
Query:   61 MSIPTTMKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLYP--APKPEILGREXXXXXXXXXPGTSGFQVGD--RVAWLS---------------------------TGGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYRSVED 660
            MS+PTT KAVV E  GGP  L YK   PVPTP+  ++L+    SGV + D +   G +P     P + G E            +G+++GD   + WL+                            G + +Y        A++P+G           +G+TV   +K T  +Q G+WV +         L  Q  K +G +VI   GG EK   VKSLGA+  +D+   +D
Sbjct:    1 MSVPTTQKAVVFESNGGP--LLYK-DIPVPTPKPNEILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALK-TAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEKGEFVKSLGAEAYVDFTVSKD 227          
BLAST of FC931955 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18
Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   79 MKAVVVEQTGGPEVLQYKTSYPVPTPQAGQLLVRNNISGVNYIDTYFRTGLY---PAPKPEILGREXXXXXXXXXPGTSGFQVGDRVAWLST--GGYAEYTAVPVALTAKIPEGISDEDIMASFLSGLTVLSFVKETYPVQKGDWVLLHXXXXXXXFLMTQILKILGAKVIGTAGGPEKCALVKSLGADVVIDYR 648
            M+A+ V + GGPEVL+ ++   VP PQ+ Q+L++ +  GVN ++TY R+G Y   PA  P   G +          G S F+ GDRV   ST  GGYAE+       T  +PE +      A  +   T    +  +   + G+ VL+H           QI +  G KV+GTAG  E   LV   GA  V +++
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSRKPA-LPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHK 201          
The following BLAST results are available for this feature:
BLAST of FC931955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
QOR_YEAST5.887e-3538.58Probable quinone oxidoreductase OS=Saccharomyces c... [more]
QOR_SCHPO4.518e-2737.70Probable quinone oxidoreductase OS=Schizosaccharom... [more]
QOR_PSEAE1.113e-2537.70Quinone oxidoreductase OS=Pseudomonas aeruginosa G... [more]
QOR_SALTY6.106e-2438.59Quinone oxidoreductase OS=Salmonella typhimurium G... [more]
QOR_ECOLI5.169e-2336.96Quinone oxidoreductase OS=Escherichia coli (strain... [more]
ZADH2_MOUSE1.721e-1830.99Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_HUMAN1.721e-1832.65Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
ADH2_PICST1.721e-1829.87Alcohol dehydrogenase 2 OS=Pichia stipitis GN=ADH2... [more]
ADH1_PICST1.721e-1829.44Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
QOR_RAT2.935e-1833.33Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]

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Properties
Property NameValue
Genbank descriptionC34203A02EF PostHarveN Citrus clementina cDNA clone C34203A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931955 ID=FC931955; Name=FC931955; organism=Citrus clementina; type=EST; length=671bp
GATAGGACTTCGCAATCACATTGTCCCTCCATCATGAACCAATTCATTCC
AATCCGCAACATGTCTATCCCAACAACCATGAAGGCTGTAGTGGTCGAGC
AGACCGGCGGTCCTGAAGTGCTGCAATACAAGACCTCATACCCAGTTCCT
ACACCACAAGCAGGACAGCTGCTAGTGCGCAACAACATTTCCGGCGTTAA
CTATATCGACACCTACTTCCGGACGGGCCTATACCCCGCGCCCAAGCCCG
AGATCTTAGGCCGCGAGGGCGCTGGTGTTGTCGCTGCTGTCGGTCCCGGG
ACTTCTGGATTTCAGGTCGGTGATCGGGTTGCATGGTTGTCTACTGGTGG
GTATGCCGAGTACACTGCAGTACCAGTGGCCCTGACTGCTAAGATCCCCG
AGGGAATCAGTGATGAGGATATCATGGCGTCGTTCCTGAGCGGTTTGACA
GTGCTTTCTTTCGTAAAGGAGACTTACCCTGTGCAGAAGGGCGATTGGGT
TCTTCTTCATGCTGCGGCTGGTGGTGCTGGCTTCCTTATGACGCAGATTT
TGAAGATTTTGGGTGCCAAGGTCATTGGTACTGCTGGCGGCCCAGAGAAG
TGTGCGCTTGTGAAGAGCCTCGGTGCCGATGTGGTGATTGATTATCGCAG
TGTGGAAGATAAGAACTGGGT
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