FC932014

Overview
NameFC932014
Unique NameFC932014
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15432 contig Ccv1_Contig15432:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 2.827e-63
Identity = 99/142 (69.72%), Postives = 120/142 (84.51%), Query Frame = 1
Query:  196 MGHFSSMFYGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKK 618
            MGHFSSMF GLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN AS+FS+RGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLCNWQ+ LA+A+L P++DL+   K
Sbjct:    1 MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNNLASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLCNWQKILAQATLEPELDLEGSNK 142          

HSP 2 Score: 49.6766 bits (117), Expect = 2.827e-63
Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  615 KDSWIHIWKHSYVKTCAAVDQELEQHRQIDSF 710
            K S   IWK SY+KTCA VDQELE HR+IDS+
Sbjct:  143 KISRFDIWKQSYLKTCATVDQELEHHRKIDSY 174          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.150e-58
Identity = 96/139 (69.06%), Postives = 114/139 (82.01%), Query Frame = 1
Query:  196 MGHFSSMFYGLARSFSIRKGKN--SESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLL-PDIDL 603
            MGHFSSMF G+ARSFSI+K KN  S     + A + MA+EAK+ E+ILRSSG +N D SNN ASVFSRRGEKGVNQDCAIVWE +GCQ DM+FCGIFDGHGPWGHFV+K+VR SMP SLLCNW+ETL++ ++  PD +L
Sbjct:    1 MGHFSSMFNGIARSFSIKKAKNINSSKSYAKEATDEMAREAKKKELILRSSGCINADGSNNLASVFSRRGEKGVNQDCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISLLCNWKETLSQTTIAEPDKEL 139          

HSP 2 Score: 46.2098 bits (108), Expect = 1.150e-58
Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 3
Query:  633 IWKHSYVKTCAAVDQELEQHRQIDSF 710
            IWK+S++KTC AVD ELE HR+IDSF
Sbjct:  144 IWKYSFLKTCEAVDLELEHHRKIDSF 169          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.207e-38
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1
Query:  223 GLARSFSIRKGK--NSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPD 594
            GLAR+ S +KGK  + +   GR  A++M K++K+N  +L +SGFV+ +SS  F S+ S RGEKG+NQD AIVWE FGCQ D+ FCG+FDGHGPWGH +AK+V++S PSSLLC WQ+TLA  S  P+
Sbjct:   10 GLARTVSTKKGKKLSEDEDGGREIAKSMIKDSKKNSTLLGTSGFVSSESSKRFTSICSNRGEKGINQDRAIVWEGFGCQEDITFCGMFDGHGPWGHVIAKRVKKSFPSSLLCQWQQTLASLSSSPE 135          

HSP 2 Score: 24.2534 bits (51), Expect = 1.207e-38
Identity = 9/26 (34.62%), Postives = 17/26 (65.38%), Query Frame = 3
Query:  633 IWKHSYVKTCAAVDQELEQHRQIDSF 710
            +WK + +KT + +D +L+    IDS+
Sbjct:  142 LWKQACLKTFSIIDLDLKISPSIDSY 167          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.158e-32
Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 1
Query:  196 MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLL 588
            M H SS+  GLARS S+ K +         AA A A        +LR+SG +  + S  FA+V SRRGEKG+NQDC+IV E FGC+   + CGIFDGHG WGH+VAK VRES+P +LL  W+E +  A+L+
Sbjct:    1 MRHISSLLQGLARSLSVGKERKGGDGDDGKAAAATATA------VLRTSGTLWGEGSETFAAVCSRRGEKGINQDCSIVCEGFGCEEGSVLCGIFDGHGQWGHYVAKAVRESLPPALLRRWREAVTLAALI 125          

HSP 2 Score: 33.113 bits (74), Expect = 7.158e-32
Identity = 12/25 (48.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  633 IWKHSYVKTCAAVDQELEQHRQIDS 707
            +W+ SY+  CAAVD EL   R++D+
Sbjct:  139 LWRQSYLAACAAVDAELRASRRLDA 163          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 1
Query:  235 SFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDS 609
            +FS+RK KNS+    R  +   + + +R E + +  G + ++ S   A +++++G+KG NQD  +VWE FG + D +FCG+FDGHGP+GH VAK+VR+++P  L   W+  +    +L  I  D+
Sbjct:   21 AFSVRKRKNSKK---RPGSRNSSFDYRREEPLNQVPGRMFLNGSTEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDT 142          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 1
Query:  325 MILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKK 618
            ++ R  G + ++ S +  S+FS++G+KG NQD  IVWE FG   D +FCG+FDGHGP+GH VAK+VR+ +P  L  + +  ++   +L +I L++D +
Sbjct:   51 LLHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVFDGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDR 148          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  238 FSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAE 576
            FSI  G       G G  E   +E  + E      G V V+ ++  A + +++G KG NQD  +VWE F   +D +FCG+FDGHGP+GHFVAKKVR+S+P  +   W+ +  E
Sbjct:   49 FSIGVGGKKLHHGGGGGGEMTEEELAKVE------GRVCVNGASAAACLHTQQGRKGTNQDAMVVWENFNT-SDSVFCGVFDGHGPYGHFVAKKVRDSLPVKIRTLWKTSANE 154          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-16
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 1
Query:  382 VFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLL 549
            +F+++G KG+NQD  IVWE+F    D+ FCG+FDGHGP GH VA+KVR+S+P  LL
Sbjct:   63 IFTQQGRKGINQDAMIVWEDF-MSKDVTFCGVFDGHGPHGHLVARKVRDSLPVKLL 117          

HSP 2 Score: 26.9498 bits (58), Expect = 4.287e-16
Identity = 9/32 (28.12%), Postives = 20/32 (62.50%), Query Frame = 3
Query:  615 KDSWIHIWKHSYVKTCAAVDQELEQHRQIDSF 710
            +D    +W+ +++K+  A+D+EL  H  ++ F
Sbjct:  151 EDKLNFLWEEAFLKSFNAMDKELRSHPNLECF 182          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  343 GFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN 555
            G +  + ++  AS+++ RG KGVNQD  +VWE F  + D +FCG+FDGHGP+GH V+K+VR+ +P  L  N
Sbjct:  108 GRIAANGASAAASLYTMRGNKGVNQDAMLVWENFCSKEDTIFCGVFDGHGPYGHLVSKRVRDLLPIKLSAN 178          
BLAST of FC932014 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 1
Query:  343 GFVNVDSSNNFASVFSRRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSL 546
            G +  + + N A +F+R+G+KG NQD  + WE +  ++D +FCG+FDGHGP GH +A+KVR+ +PS L
Sbjct:   34 GRIAGNGAGNVACLFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLIARKVRDILPSRL 101          
The following BLAST results are available for this feature:
BLAST of FC932014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
P2C73_ARATH2.827e-6369.72Probable protein phosphatase 2C 73 OS=Arabidopsis ... [more]
P2C34_ARATH1.150e-5869.06Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]
P2C41_ARATH1.207e-3857.14Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]
P2C48_ORYSJ7.158e-3249.62Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
P2C33_ARATH3.172e-2137.60Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
P2C74_ARATH1.924e-1841.84Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C66_ORYSJ1.056e-1640.71Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C01_ARATH4.287e-1658.93Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]
P2C38_ORYSJ2.601e-1547.89Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]
P2C75_ORYSJ4.436e-1547.06Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC34203G03EF PostHarveN Citrus clementina cDNA clone C34203G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932014 ID=FC932014; Name=FC932014; organism=Citrus clementina; type=EST; length=710bp
GAGAATTCTCAGCTCAATAAGGGATCACCGGGATTGCTTCGGACTCCGGC
GGCTGACGTCAGCTTTCCGGCTATTGGTTCAGAGCCCGGCTATCTGATAT
TGTTTGTTTCTCCATCAAAGGCAGATTTTGAGTCTACATAAAGGGAAAGA
AGAAGCCAACATTGACTCTGGTATGGGGGGATTGAATTTGAGGAAATGGG
GCATTTCTCCTCCATGTTTTACGGATTGGCAAGGTCCTTTTCAATCAGAA
AAGGGAAAAATTCTGAGAGTTGTGCTGGGAGAGGAGCTGCAGAAGCAATG
GCTAAAGAAGCCAAAAGGAATGAAATGATTTTAAGGTCTTCTGGTTTTGT
AAATGTTGATAGTTCCAATAACTTTGCCTCAGTTTTCTCCAGGCGAGGCG
AAAAAGGAGTAAATCAAGATTGCGCAATTGTCTGGGAGGAATTTGGATGT
CAGGCAGACATGATGTTTTGTGGGATATTTGATGGGCATGGTCCTTGGGG
TCATTTTGTGGCTAAAAAGGTCCGGGAATCAATGCCTTCATCGTTGCTTT
GTAATTGGCAGGAGACTCTTGCTGAAGCTTCTCTTCTCCCAGATATTGAC
TTGGATTCGGATAAAAAGACTCATGGATTCACATATGGAAGCATTCTTAT
GTTAAGACTTGTGCTGCTGTTGATCAAGAGCTTGAGCAGCATCGACAGAT
TGATTCATTC
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